Danio aesculapii (panther danio): 130241483
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Entry
130241483 CDS
T11734
Symbol
pds5b
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B
KO
K11267
sister chromatid cohesion protein PDS5
Organism
daes Danio aesculapii (panther danio)
Pathway
daes04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130241483 (pds5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
daes03036
]
130241483 (pds5b)
03400 DNA repair and recombination proteins [BR:
daes03400
]
130241483 (pds5b)
Chromosome and associated proteins [BR:
daes03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
130241483 (pds5b)
DNA repair and recombination proteins [BR:
daes03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
130241483 (pds5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT_EF3_N
PI-TkoII_IV
INTS7_N
betaPIX_CC
EnP1_C
Motif
Other DBs
NCBI-GeneID:
130241483
NCBI-ProteinID:
XP_056329253
LinkDB
All DBs
Position
15:15098465..15157291
Genome browser
AA seq
1408 aa
AA seq
DB search
MAHSKNRATDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSAQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFQVINNGHNQKVHMHMVDL
MSSIVCEGDSVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSVSDLSEHVFDLILELYNIDNHLLLSVLPQLEFKLKSNDNDERLQVVKLLAKMF
GAKDSELASQNKPLWQCYLGRFNDIHVPVRLECVKFASHCLMNHPDLAKDLTEYLKVRSH
DPEEAIRHDVIVSIVTASKKDLSLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYA
LQAEAGKEAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYLVPHNLETTERMKCLYYL
YATLDGNAVKALNEMWKCQNMLRHHVKDLLDLVKQPKSDSYSKAVFSKVMVITRNLPDPG
KTQDFVKKLAQVLEEDEKIRKQLETLVSPSCSCKQAEVCVKEITKKLGSPKQPSNPFLEM
VKFLLERIAPVHIDTESISALIKQVNKSIEGTADDEDEGVPTEQAIRAGLELLKVLSFTH
PVSFHSAETFESLLGCLKMDDEKVAEAALQIFKNTGNKLEESFPHIKSVLLPVLQHKAKK
GPPRQAKYAIHCIHAMFSNRDTHFAQIFEPLHKGLDTDNMEQLITPLTTLGHLAMLAPEQ
FAAPLKSLVANFIVKDLLMNDRIPGKKTTKLWVPDDEVSPETSAKIQGLKLMVRWLLGVK
NNQSKSGNSTLRMLTAILSSDGDLTEQGKMGKPDMSRLRLAAGCAILRLAQEPCYHEIIT
LEQYQLCALVINDECYQVRQAFAQKLHKGLCRLRLPLEYLAVFTLCAKDPVKERRAHARQ
CLVKNINLRREYLKQHAAVSEKLISLLPEYVVPYAIHLLVHDPDYVKVQDIEQLKDIKEA
LWFVLEILMAKNENNSHAFIRKMVENIKQTKDGQCPDDPKINEKLYTVCDVAMNIVISKS
TTYSLESPKDPVLPARYFTQPDKNFSNTKNYLPPEMKSFFTPGKPKAANVLGAVNKPLSA
TGKLQTKLSRMETISNASSNSNPSSPGRSKGRLDSGDHSENEDISMKSPSETEKPTRGRK
RGAVASQDDKGQESKPKRGRKKAANTSTDDAEDQWGEDGSLAEANLETEDEQNSPPKRGR
RGRPPKSAAAKEETPSKGRRGRRKAAPPVEEDNEDEQQEEEDEDEEEDAGSENMEVKPKG
RRGRKPKVDVSETASDSVESTPQKRRGRPPKSQTAARKASGGRSRAAAHQEVESEEEMDT
VQQSEEDEDESVDSSPKVRRKVGRRDRR
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atggctcactccaagaatcgagccacggatggcaaaatcacctacccgccgggggtgaag
gagatctccgataagatctccaaggaggagatggttcggagactgaagatggtggtgaaa
accttcatggacatggaccaggactctgaggaggagaaggaactctatctgaacttggcc
ttgcatcttgcctctgattttttcctcaaacatccagacaaagatgtcagactgctagtg
gcctgctgtcttgcggatatttttcgcatctacgcccccgaggctccatacacatcacct
gataaacttaaggatattttcatgttcataactcggcagctgaaaggtttggaggacaca
aagagtgctcagtttaatcgatatttttatctactagagaacatcgcttgggtgaaatcc
tacaacatctgctttgaattagaggacagcaatgagatctttactcagctctacagaacg
ctgttccaagtgataaacaatggacacaatcagaaagttcacatgcatatggtggatctc
atgagctcaattgtgtgcgagggcgactctgtttcacaggaactccttgatacggttctg
gttaaccttgttccagcacacaagaatctcaacaagcaagcatacgatctggccaaagcc
ttgctgaagagaaccgctcaggccatagagccgtacatcaccaacttttttaaccaggtg
ctgatgttggggaagacttcagtcagtgatctgtcagagcatgtgtttgacttgatcctg
gagctctacaacatcgacaaccatttactgctgtccgtcctgccgcagctggagttcaaa
ctcaagagcaatgataacgatgagcgcctgcaggtagtgaagctcctggccaagatgttt
ggtgcaaaggattcagagctggcttcacagaacaaacctctctggcagtgctaccttggg
aggtttaatgacatccatgtccctgttcgattggaatgtgtgaagtttgccagccactgc
ttgatgaaccatcccgacttggcaaaagatctcacagagtatttgaaagtaaggtcacat
gacccagaggaggccattcggcatgacgtcatcgtgtccattgtgactgcctccaaaaaa
gacctctcgctcgtcaacgatcacctgctgaactttgtgcgggagaggactctagataag
aggtggcgtgtccgtaaggaggctatgatgggcctggctcagatctataagaagtacgcc
ttacaggcagaggctggcaaagaggcagccaagcagatctcctggatcaaagacaaactg
ctccacatttattaccagaacagcatcgacgaccggttacttgtggagaggatcttcgcc
cagtatcttgtgcctcacaatctggagactacagagcgaatgaagtgtctatattacttg
tacgccacattggatggaaatgctgtcaaagctctaaatgaaatgtggaagtgtcagaac
atgctgagacatcacgtcaaagatctcctggatcttgtaaaacagccaaagtctgactct
tacagcaaggccgtattctcaaaggtcatggttatcacaagaaacctgccagaccccggc
aagacgcaagactttgtgaagaagcttgctcaggttcttgaagaagacgagaagataagg
aagcagctggagactcttgtgagcccgtcctgctcgtgtaaacaggcagaagtctgcgtg
aaggagatcaccaaaaaacttggaagccccaaacagcccagcaaccctttcctagagatg
gtgaaattcttattggagaggatagcacctgttcacatcgacacagagtctatcagtgca
cttatcaaacaggtaaacaagtctatagaaggaactgctgatgatgaagatgagggagtc
ccaaccgagcaagccatcagagccggcctggagctgctgaaggtcctatccttcacccac
cctgtgtcattccactctgctgaaaccttcgagtctttgctgggctgcctaaaaatggac
gatgagaaggttgcagaggccgcgctgcagatcttcaaaaacactggcaacaaactggag
gagagcttcccacacatcaaatcagtcctgttaccagtactgcagcacaaagcaaaaaag
ggccctcctcgccaggccaaatatgccatccattgcatccatgccatgttttccaacaga
gacacacactttgcacagatattcgagcctctgcataagggtctagacacagacaacatg
gagcaactcatcacgcctttaacgacgctgggacacctggccatgctggccccagaacag
tttgcagctccgctcaaatctttagtggccaatttcatagttaaagacctgctaatgaac
gaccggattcctggtaagaaaaccaccaagctgtgggtcccagatgatgaagtctctcct
gaaacatcggctaagattcagggtctgaaactgatggttcgctggctgctcggtgtgaag
aacaaccagagtaaatctggaaactcaactctgcggatgttgacggcaatcctgagcagc
gatggagatctgacggagcagggcaagatggggaagccggacatgtctcgtctgcgtctg
gcagccggctgtgcgattctccgtctcgctcaggagccgtgctaccatgagatcatcacc
cttgagcagtaccagctctgcgccctcgtcatcaacgatgagtgctaccaggtgcgacag
gctttcgctcagaagctgcacaaaggtctttgtagattacgtctgccgctggagtatctg
gctgtgttcacattgtgtgccaaagacccggtgaaggagcgcagggcacatgcccgccag
tgcctggtcaaaaacattaacctccgcagggaatacctgaaacagcatgcagcagtcagt
gagaagctgatatctctcctgccggagtatgtggtgccatatgcaattcaccttttggtc
cacgacccagattacgtgaaggtccaggacatcgagcagctcaaagacatcaaagaggct
ttgtggtttgttttggagatcctaatggccaaaaatgaaaacaacagccatgcatttatc
aggaaaatggtggaaaacattaaacagacaaaagatggacagtgtccggatgatcccaag
attaatgagaaactgtacacggtgtgtgatgtagccatgaatattgtcatctccaagagc
accacatacagtctagagtcacctaaagatcccgtactgcctgcacgctacttcacacaa
ccagacaagaatttcagtaacacgaaaaactatctgcctcctgagatgaagtccttcttc
accccaggaaagcctaaggcagcaaacgtgttgggtgctgtgaacaagccgctgtccgcc
acaggaaaactgcagaccaaactctcacgcatggagaccatcagcaacgccagcagcaac
tccaaccccagctcgcccggtcgcagtaaaggaagactggactctggtgatcacagtgag
aatgaagacatttcaatgaagagcccgtctgagactgaaaaacccaccaggggccgcaag
aggggcgcagtggccagtcaggacgacaagggccaggagtccaaacccaaacgtggccgg
aagaaagcagcaaacacaagcaccgacgacgctgaagaccagtggggggaagacggcagt
ctggcagaggcaaacctggagactgaagatgagcagaacagtccacctaagagaggacga
cgaggacgaccaccgaagtcagccgctgctaaggaggagacgcccagcaaaggccggcgg
ggtcgtaggaaggccgctccacctgtagaggaggacaatgaggacgagcagcaagaggaa
gaggacgaggatgaggaggaagatgcaggcagtgagaatatggaggtcaagcctaaaggc
agacgaggacgcaaaccaaaagtggacgtatccgaaaccgccagcgactcggtggaatcc
acacctcagaaaagaagaggacggcctccaaaatcacagacagcagccaggaaagccagc
ggagggagatcaagagctgctgctcatcaggaagtggagtctgaagaggagatggacact
gtccagcagagcgaagaggacgaggacgagtctgtagactcttcacctaaagtgcgacgg
aaggtgggcagaagagatcgaagatga
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integrated database retrieval system
