Danio aesculapii (panther danio): 130241842
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Entry
130241842 CDS
T11734
Symbol
srsf1a
Name
(RefSeq) serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
daes Danio aesculapii (panther danio)
Pathway
daes03040
Spliceosome
daes05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130241842 (srsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130241842 (srsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
daes03041
]
130241842 (srsf1a)
Spliceosome [BR:
daes03041
]
Common components
Common spliceosomal components
SR proteins
130241842 (srsf1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
130241842
NCBI-ProteinID:
XP_056329780
LinkDB
All DBs
Position
15:32195846..32199589
Genome browser
AA seq
259 aa
AA seq
DB search
MSGGVIRGPAGSNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEF
EDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGMGRGGFGGGGGGGGGGGGGGGGGGAPR
GRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMT
YAVRKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNNRSRSYSPR
RSRGSPQYSPRHSRSRSRS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtggtgtgatccgcggccctgctggaagcaacgattgccgcatatatgtggga
aacctgccgcccgatattcgcaccaaagatgtcgaagatgtgttttataagtacggagcc
atccgagacatcgatctgaagaatagacgaggcggacctccattcgcctttgtcgagttt
gaagaccccagagatgcggaggatgctgtttatgctcgtgatggctatgactatgatggc
tatcgactccgagtggagtttcctaggagtggaagaggaatgggcagaggaggttttggt
gggggtggtggtggaggcggcggtggcggcggaggaggaggtggtggtggggctcctaga
ggtagatatggacccccatccagacgttcggagtacagagtaattgtttctgggcttcca
ccgagcggcagctggcaggatctgaaggatcacatgcgtgaagcaggtgatgtatgttac
gctgacgttttccgagatggaactggtgtggtggagtttgttcgcaaagaggacatgacc
tacgccgttcgcaaactggataacacaaaattccggtcgcatgagggagaaactgcgtac
atccgtgtaaaggtggacggaccccgcagtccaagctatggaagatcaaggtcaaggagc
cgcagtcgcagcaggagtcgcagccgcagcaacaaccgtagccgaagctactctccacgc
cgcagccgaggatccccgcagtactcgccacgtcatagccgttcccgctctcgctcctaa
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