Danio aesculapii (panther danio): 130242108
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Entry
130242108 CDS
T11734
Symbol
ptbp2b
Name
(RefSeq) polypyrimidine tract-binding protein 2b isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
daes Danio aesculapii (panther danio)
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
daes03041
]
130242108 (ptbp2b)
Spliceosome [BR:
daes03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130242108 (ptbp2b)
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GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_occluded
RRM_8
RRM_10
RRM_PARP14_3
RRM_ACIN1
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
130242108
NCBI-ProteinID:
XP_056330098
LinkDB
All DBs
Position
2:complement(18388150..18404984)
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AA seq
538 aa
AA seq
DB search
MDGIASDVAVGVKRSSDDLLSGSLYSSPNSSVTANGSDSKKLRVEDSMDSPPSRVIHIRK
LPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVP
VFIQYSNHKELKTDSALNQRAQAVLQAVSAVQEGGSPSSDMASKSVLTPAPSPVLRIIID
NMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNS
CCTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPPVDPSVAAALSKDSPSLLGTPS
GMVTSYSSGGGFPSSLGAISPLSAAAAAAAAAGRVALSGHSVPGGVLLVSNLNEEMVTPQ
SLFTLFGVYGDVQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMYGKIIRVTLSKHQ
TVQLPREGLDDQGLTKDFTSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPDNVTEEDLRL
LFSNSGGTVKAFKFFQDRKMSLLQMATAEEAIQALIDLHNYDMGRGHRLRVSFSKSTI
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgcaagtgatgttgcagttggtgtgaagagaagctcagatgacttgctg
tctggcagtctgtacagtagtccaaactcttcggtcactgctaatggaagtgacagtaag
aaactgagggtggaggacagcatggacagcccaccgtcaagagttattcatattcgtaaa
ctccccaacgaggtttctgagactgaggtcatcgccctaggattgccctttggaaaggtc
acaaatatactaatgcttaaaggcaaaaatcaggcatttttagagctgggaacagaggaa
gctgctgttaccatggtgaactactacacagctgttacacctcaagtgcgtaatgtccca
gtgttcattcagtactccaaccacaaagagctcaagacagacagcgcactcaaccagcga
gctcaggccgtgctgcaggcggtgtcagcggtccaggagggcggctctccaagctcggac
atggccagcaagagtgtgttaacgcctgcccctagcccagtactgcgaataatcatcgac
aacatgttctacccagtcaccctggacgtcctccaacagatcttctccaagtttgggacg
gtcatgaagataatcacgtttaccaaaaataatcagtttcaggctcttctgcagttcagt
gacccagtaaatgcccagcaggccaaactgtccttggacggccagaacatttacaactct
tgctgcactctgcgcattgacttctccaagctggtcaacctgaatgtaaaatacaacaat
gacaaaagccgggattatacccgacccgagctgccagcgggagatggccaaccaccagtg
gacccgtctgtggccgccgctctcagcaaagattccccctccctacttggtactccctct
ggaatggtaacttcctactctagtggtggagggtttccatcttctctaggggccatcagc
cctctgagtgcagcagcggcggcggcagcagcagcaggcagggtagcgttgtccggtcat
tcagtacctggcggagtgctactggtcagcaatctcaatgaagagatggttacgccccaa
agtctgtttaccctcttcggtgtctatggtgacgtgcaacgcgtgaaaatcctttacaat
aagaaggacagtgctctaatccagatgtctgatggaaaccaagcccagttggccatgagc
catctgaacgggcagaaaatgtatggcaagatcattcgtgtgaccctctcaaagcaccag
acggtacagctgccgagagagggtttagatgatcagggcctgacgaaggacttcactagt
tctccactgcatcgcttcaaaaagcctggctctaagaacttccagaacatcttcccccct
tcagctacacttcatctctctaacatacctgacaatgtgacagaagaggatttacgactg
ctcttctcaaactccggcggtacagtgaaagcgttcaagtttttccaagatcgcaaaatg
tctctgctgcagatggccacggctgaggaggcaattcaggcgctcatcgaccttcacaac
tatgacatgggccgcggccaccgcctgagagtgtccttctcaaagtccaccatctga
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