Danio aesculapii (panther danio): 130243076
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Entry
130243076 CDS
T11734
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
daes Danio aesculapii (panther danio)
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daes03019
]
130243076 (trim71)
04121 Ubiquitin system [BR:
daes04121
]
130243076 (trim71)
Enzymes [BR:
daes01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130243076 (trim71)
Messenger RNA biogenesis [BR:
daes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130243076 (trim71)
Ubiquitin system [BR:
daes04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130243076 (trim71)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
zf-B_box_Trim66
zf-C3HC4
zf-RING_2
Invasin_D3
RE_Eco47II
DUF4094
Motif
Other DBs
NCBI-GeneID:
130243076
NCBI-ProteinID:
XP_056331100
LinkDB
All DBs
Position
16:48331559..48386250
Genome browser
AA seq
824 aa
AA seq
DB search
MCEVILWSSAQMASFPDSDLQTCPLCKELCGCSAPISSNSSTSSSSSQTSNSSSTSSTRR
LHVLPCLHAFCRQCLEGQRSPGDPLKLRCPTCDQKVSLSESGVDALPSSNFLFSNLLDVV
VSAEEQGKNGRSSAVVHHGGLLRPQHLSDPQCSSCDEGNPATSHCLDCQEYLCDNCVRAH
QRVRLTKDHFIEGLLESLHLANRTNNSNTPVSISQSFHNSFSMLNVFQERMDFCQHHDDA
VLRFFCDSCTVPICRECSLGRHAGHSFTYLQEALQDSRALTIQLLADAQQGRQAIQLSIE
KAQAIAEQVELKAKVVQSEVKTITLRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKL
HQNLTKLDSTIATVTQVLEEGRSIDVLLAREHMLNQLQELKSLRCILQPQEDDRIVFTPP
DQALLIAIKSLGLISSGAFATASKAHGEGIKRALQGKLASFTVVGYDHDGEPRLSGGDSV
SVVLMSPDGNLSSAEVSDHQDGTYTVSYLPKGEGEHLLSVLICNQHIEGSPFKVMVKSGR
SYGGVGLTMASFGGEGDGDGQLCRPWGICVDKEGYVVVADRSNNRVQIFKPCGTFHHKFG
TLGSRPGQFDRPAGVACDSQRRIIVADKDNHRIQIFTFDGQFLLKFGEKGTKNGQFNYPW
DVAVNFEGKILVSDTRNHRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVT
DFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQEDRIIVADSRNHRIQVFEPN
GNFLCKFGTHGNGFGQMDRPSGIAVTPDGVIVAVDFGNNRILMF
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaagttattctgtggtcctctgcgcaaatggcgtctttcccagactccgacctg
caaacatgtccgctctgcaaggagctgtgcggctgctctgctccgatctcctccaactca
tctacctcctcctcgtcctcccagacctccaactcctcatctacctcatccaccaggaga
ctgcacgtcctgccctgtctgcacgccttctgcaggcagtgcctggagggccagcggagc
cccggcgaccccctgaagctcagatgccccacatgcgaccaaaaggtgtctctatcggag
tcgggcgtggacgcgctgccctcctccaactttctcttcagcaacctgctggacgtggtg
gtgtccgctgaagagcagggtaagaacgggcggtcttctgcggtggtccatcacggtggt
cttctgcgaccccagcacctctcggacccccagtgcagctcttgtgacgagggcaacccc
gctacctcccactgcctggactgccaggagtacctgtgcgacaactgcgtcagggcccac
cagagggtccgactcaccaaagaccacttcatcgagggcctgctggagagcctacacctg
gccaaccgcaccaacaactccaacaccccggtctccatctcccagtccttccacaacagc
ttctccatgctcaatgttttccaggagaggatggacttttgccagcaccatgatgacgcg
gtcctgcgcttcttctgcgacagctgcaccgtgccaatctgtagagagtgcagtttgggc
agacacgcgggtcacagcttcacgtacctgcaggaagcattgcaggactccagagcgctg
accatccagctcctcgcagacgcacagcagggcagacaggccatacagctgagcatcgag
aaagcccaggccattgctgaacaggtggagctgaaggctaaggttgtgcagtcagaagta
aaaacaatcactctccgtcataagaaagccctggaagaacgggaatgcgagctgctttgg
aaggtggagaagatccgccaggtgaaggcaaagtcactctacctgcaggttgagaaacta
caccagaatctcacaaagctggatagtactattgccacagtgacacaggttcttgaagag
ggccgtagcatagatgtcctgctagcccgcgagcacatgttaaatcaactacaggagctc
aaatctctccgttgcatcctacagccccaggaagacgatcgcatcgtgttcacccctcca
gaccaggctcttcttattgccatcaagtccttgggcctcatcagcagtggagcttttgcc
acagcatccaaagctcacggagaaggcattaagagggcgctgcaaggaaagctagcttcc
ttcactgttgtaggatacgatcatgatggagagcccagattgtccggtggtgacagtgtc
tcggtcgtgcttatgagtccagatggtaatctgtccagtgcagaagtttccgaccaccag
gatggaacgtacacagtcagctatctgcctaaaggtgagggggagcatttgctgtctgtg
cttatatgcaatcagcacattgagggaagccccttcaaagtgatggtcaagtcgggtcgc
agttacggtggtgtcggtttgaccatggcgtcttttggtggagagggggatggggacggg
caactgtgtcgaccttggggcatctgcgtggataaggagggctatgtggtggtcgctgac
cgaagcaacaaccgcgtgcagatcttcaagccttgtggcacattccaccacaagtttggc
actttgggctcacgaccgggccagtttgaccgccccgctggggtcgcctgtgacagccag
aggagaatcattgtggcagataaggacaatcaccgcatccagatcttcaccttcgatggg
cagtttcttctcaagtttggtgagaagggaaccaaaaatggtcagttcaactacccatgg
gatgtggccgtcaactttgaggggaagatcttggtttcagatacacgcaaccaccgcgtg
caactctttgggccagacggaactttcctcaacaagtatggattcgaaggtgccctctgg
aaacatttcgactcccctcgtggcgtggccttcaatcaggaaggtcaccttgttgtgact
gacttcaacaatcatcgtctgctcgtcatcaggcctgactgccagtccgcacgcttcctt
ggatccgagggaactgggaatggccagttcttgcggccacaaggtgtagctgtggaccag
gaggatcgaattatcgtggcggactcccgcaaccatcgcattcaggtgttcgaacccaac
ggcaactttttatgcaagtttgggactcacggtaatggctttggccaaatggatcgcccc
tctggtatagcagtgaccccagatggagtgattgtggccgtggatttcggaaacaatcga
atcctcatgttctga
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integrated database retrieval system
