KEGG   Danio aesculapii (panther danio): 130243497
Entry
130243497         CDS       T11734                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
daes  Danio aesculapii (panther danio)
Pathway
daes03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:daes00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    130243497 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:daes03400]
    130243497 (xrcc1)
DNA repair and recombination proteins [BR:daes03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     130243497 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT F5_F8_type_C
Other DBs
NCBI-GeneID: 130243497
NCBI-ProteinID: XP_056331649
LinkDB
Position
16:complement(1752281..1798534)
AA seq 619 aa
MPELKLKHVVSCSSEDNTHKADNLLSSDTYRKWKAARPGEKQVSVILQLEKEEQIHSIDI
GNEGSAFIEVLVGHSTSVKDQDFEVLLVTSSFMSPTESRNGTNTNRVRFFGPGQLVKAQS
QEKWDRVKIVCSQPYSKTIAYGISFIKLHSPPDGNEAPVSTPPKLTKLGQFRVKEESPSA
GSNVQPGALFFSRDTSAKSSTALKVSPQNERLSYAAAALKTEGSSTHTSASDTQQAPVKR
KFEFSKERLEASGPPAKKPSSSASAESTRKAKARSSTGTSPSSSASPAQKSSDKRESPKT
KPESKPKSKPKPKSSESVPFNRILEGVVFVLSGFQNPFRADLRDKALALGARYRPDWTPD
ATHLICAFANTPKYSQVKAAGGIIVRKEWVMDCHKNKQKISCKRYLMDGAESSSESEAEQ
DESEEETPKAKTPEKKPVTPKKPQPIKEEEEKEYGGSTDEEGPGKDKCDNSSGMDTEDEL
NRVELASRKKKAAEQSADVVKNEDPYGGSTDENTDAEEEEDKPIPELPDFLKGKRFYLYG
KFPDNQKRLLLRYIIAFNGAVEDYMSEKVQFVITSEGWDDSFEDALMENGSLSFVKPTWI
FAINDRQKMLPYQPYTVVP
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgcctgaactcaaactcaagcatgtcgtgtcctgcagcagtgaagataatactcataaa
gcggacaatctcttgagctctgacacctacagaaaatggaaagctgcgagacctggagaa
aagcaggtttctgtcatccttcaattggaaaaggaagagcaaattcacagcatagacatt
ggaaacgaaggctctgctttcattgaggtccttgtcggacactccacgtctgtcaaagat
caagactttgaggttctgctggtcacgtcgtccttcatgtcgcccaccgagagccgaaac
ggcacaaacacaaaccgtgtgcgtttcttcgggcccggtcagctggtgaaggcgcagtca
caggagaagtgggaccgggtgaagatcgtctgcagtcagccctacagcaagactatagca
tacgggatatccttcataaagctgcactctcctccagatgggaatgaagctccagtctcg
actccaccgaagctgaccaaactgggtcaattcagagttaaggaagagtctccctctgct
gggtcaaacgtacagcccggagctctgttcttcagcagggacacttctgctaaatccagc
accgcactcaaggtttctcctcagaatgagaggctgagttacgccgctgctgcactgaag
actgagggttcatccacacacacatctgccagcgacacacagcaggctcccgtgaagcga
aagtttgagttcagtaaagagcgtttggaagcttccggtccgccagctaaaaagcccagt
tcatctgcatctgctgaatccacacggaaagctaaagcaagatccagcacgggcaccagt
cccagcagcagcgcttctccagcacagaaatcatcagataagcgagagagtcctaaaact
aagccagagtccaaacctaaatccaaacccaaacccaagtcttcagagtctgtgccgttc
aaccggatcctggagggagtggtgtttgtgctgagcggctttcagaaccctttccgtgcg
gatctgcgggataaagcgctggctctaggtgctcgataccggccagactggactcccgac
gccacacacctcatctgtgcatttgcaaatacacccaagtacagtcaggtgaaggcggct
ggaggaatcatcgtcaggaaggagtgggtgatggactgccataagaacaagcagaagatc
tcctgcaaacggtatctgatggatggagctgaatccagttcagaaagtgaagcagaacaa
gacgagagtgaggaggaaactccgaaagcgaaaacaccagaaaagaagccagtgactcct
aaaaaaccgcagccgattaaggaagaggaggagaaggagtatggaggctcgacggatgaa
gaaggcccaggtaaagacaaatgtgataacagctctggcatggacactgaagatgagctc
aacagggtggagctggcgagcaggaagaaaaaagcagcagagcaaagtgcagatgtggtg
aaaaatgaagatccgtacggcggctcgactgatgaaaacacagacgctgaggaagaggag
gataaacccatccctgaactgccagatttcctaaaggggaagcgcttctatctttacggg
aagtttcccgacaaccaaaaaagactacttctgcgctacatcatcgccttcaatggagct
gttgaagactacatgagtgagaaggtccagttcgtcatcaccagtgaaggatgggatgac
tcttttgaagatgccttgatggaaaatgggagtctgagctttgtgaagcctacctggata
ttcgccatcaatgacagacagaagatgttgccttatcagccatacactgttgtcccttaa

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