Danio aesculapii (panther danio): 130243829
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Entry
130243829 CDS
T11734
Symbol
ascc3
Name
(RefSeq) LOW QUALITY PROTEIN: activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
daes Danio aesculapii (panther danio)
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daes03400
]
130243829 (ascc3)
Enzymes [BR:
daes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130243829 (ascc3)
DNA repair and recombination proteins [BR:
daes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
130243829 (ascc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
ASCC3_N
WHD_SNRNP200
ResIII
Helicase_C
AAA_22
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
130243829
NCBI-ProteinID:
XP_056332102
LinkDB
All DBs
Position
16:55575033..55856487
Genome browser
AA seq
2140 aa
AA seq
DB search
MSPPRLTGALRSFSNVSKQDDLTQDIHDLKTKRLKRQEIFARDGLTWQKIVQFFTQHLQK
KDQPVATQELKNILQAAKQIVGTDFGQDTIESAAVFLFKTFHNKDQIGHEETRAIKHMFG
PFPASAAELSCAAVGRLVAQIGESQVEAFIQTQSSLKTLDRSSVFGRNIAFSFDTYVLDV
QDDFPWSDGTDMEQMVDFHSFLNNNVGERRVGGEREDVYSAEELEQRNTDGSILRQEVEK
YLNEGNMVSSSAEELSTSLFEMLASTRSDDELQNELFEFLGPEGFEMISRLLQRRSDIVD
ALVSIPADSRHHFTSGKPKGLRDESNMPTYGCQVTIQSEQEKQMMKIYRKEEKKERKRER
RGDDGESSESAFHFDPMELRLQREQALLAARSSPVLGRHRDYERIRYPHVYDSYGEAIKT
SAFIGGSKMLLPEGIRRDNNKMYEEVEIPPNEPMPIGFEEKAVFISELDEIGQLVFKGMK
RLNRIQSIVFETAYNTNENLLICAPTGAGKTNIAMLTILHEIRQHIQPGGVIRKDQFKIV
YVAPMKALAAEMTNYFSKRLEPLGIAVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRK
SVGDVALSQVVRLLILDEVHLLHEDRGPVLESLVARTLRQVESTQSMIRILGLSATLPNY
LDVASFLHVNPFIGLFYFDSRFRPVPLGQSFVGIKTTNKVQQLHDMEEVCYEKVLKQIKA
GHQVMVFVHARNSTVRTAMSLIEMAKNRGELSFFQVDQGPDYGQCEKQIQRSRNKQMREM
FPDGFGIHHAGMLRQDRSLMESMFSRGYLKTLVCTATLAWGVNLPAHAVIIKGTNIYDAK
RGALVDLGILDVMQIFGRAGRPQFDKYGEGTIITTHDKLSHYLTLLTQQNPIESQFQQSL
ADNLNAEIALGTVTNVDEAVRWLSYTYLYVRMRANPLAYGINHKAYQMDPQLELYRKELV
VESGRKLDKARMIRFDERTGYFASTDLGRTASHFYIKYNTIESFNELFNAQNTEADVLSI
VSKAEEFEQIKVRDEELEELEKMLCNFCELPASGGVENGYGKINILLQTYISRGEVDSFS
LVSDLSYVAQNAARIMRALFEMALRKRWPAMTYRLLNLCKVMDKRLWGWTHPLRQFNTLP
ASALARMEDKNLTIDKLRDMGKDEIGHMLHHVNIGLKVKQCVHQIPAILLESSIQPITRT
VLRVRLSITPDFRWNDQVHGSVGEPWWLWVEDPINDHIYHSEYFLLQKKQVVSGEPQQVV
FTIPIFEPMPSQYYIRAVSDRWLGSEAVCIINFQHLILPERHPPHTELLDLQPLPITALG
NIEYESLYKFTHYNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAEMAIFRVFNVYPTSK
VVYIAPLKALVRERIEDWKIRIEEKLGRKVVELTGDNTPDMRAIAQADLIVTTPEKWDGV
SRSWQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKRVRVVGLSTALA
NARDLADWLGIGQVGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMATMNKPVFQAIRTHSP
AKPVLIFVSSRRQTRLTALDLIAFLATEDDPKQWLHQDEREMTDIIATVRESNLKLTLAF
GIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYYDGKTRR
YVDYPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLSVLSDH
LNAEIAAGTVTSKQDAMDYITWTYFFRRLVMNPSYYNLDDISHETINKYLSNLVERSLRD
LECSYCMEIQQDEQTIEPLTYGRISSYYYLKHQTIRMFKERLKPECRSHELLAILSVMHV
LCLQAMLDVVANEGWLVSALSLCNLVQMIIQARWLHDSSLLTLPHIQKQELYVFRRWSSR
GVRAGCGHQGPIEGLPELMAACDGKEDIFTSMVKEVLQPNQISQAWLYVSQLPVLELSLS
VKGFWENSVEQTERAIPAQVSSIREESSWLPLHADQEYVLQVSMRRLNAGQHRRKQDSRA
QAPRFPKPKDEGWFLVLGEVEKKELLAIKRVGFVRNHSSVSVAFYTPEKTGKCIYTLYLM
SDSYLGLDQQYDIHLNVIPASIAAQVNSEVADSVGKLALR
NT seq
6423 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctcctcggctcactggagccctgcgctccttttctaacgtcagcaaacaggat
gatttaacgcaagacattcatgatctgaagaccaaacgcttgaaacgacaggaaatattt
gctcgtgatggtctgacatggcagaagatagttcaattcttcacccaacatctacagaag
aaagatcagccggtggccactcaggagctgaagaacatcctccaagcagccaagcagatc
gtcggtacagattttggacaagacaccattgaaagtgctgcagtcttcttgtttaaaaca
ttccacaacaaagaccaaatcggtcatgaggaaaccagggccataaaacacatgttcgga
ccattcccggcgtctgctgctgaattatcctgtgcagcggtgggccgtttagtggcccag
atcggagaatctcaggtggaggctttcatccaaacacagagttctctcaagacgctggac
cggagttctgtctttggccgaaacattgctttctcatttgacacctatgtgctggatgtt
caagatgattttccctggtcagatgggactgatatggaacagatggtggactttcacagc
tttctcaataataatgttggtgagagaagagttggaggtgagagagaggatgtttactct
gcagaagaactggagcagaggaacacagacggttccattctgagacaagaggtggagaaa
tacctgaatgagggaaatatggtgtcttccagcgccgaggagctctccacctctctattc
gaaatgctggcctccacaagaagtgatgacgaactacaaaacgagctctttgagtttctg
ggtcctgaggggtttgagatgatctccaggctccttcagagaaggtcagacattgtggac
gctttggtgtccatcccagcagacagcaggcatcacttcacatcaggaaagcctaaaggc
ctgcgagatgaatccaacatgcccacatacggctgtcaggtgaccatccagtccgagcag
gagaaacagatgatgaagatctacagaaaggaggagaagaaggagagaaagcgtgagaga
cgaggagatgatggggaatcctctgaaagtgcgtttcattttgaccccatggagctgaga
ctgcagagggagcaggctttgctggcagcacgctcttctccagttttaggccggcacaga
gattacgagcgcattcgctaccctcacgtatatgattcttacggcgaagccatcaaaaca
tctgcgttcatcggaggatccaagatgctgctgcccgaggggatcagaagagacaataat
aagatgtacgaggaggtggagatcccccccaacgagcccatgcccatcggttttgaggaa
aaagcagtgttcatctcggagctggacgagatcggccagttggtattcaagggaatgaag
aggctgaacagaatccagtctatagtgttcgagacggcttacaacaccaatgaaaacctg
ctcatatgcgcccccactggtgccggaaaaaccaacattgccatgctcacaattctacat
gagatccgccagcacatacagcctggaggagtcatccgcaaggaccagtttaagattgtg
tacgtggctccgatgaaggccctggctgctgagatgactaattacttcagtaagcgattg
gagcctttaggcatcgccgtcaaggagctgacgggagacatgcagctgaccaaaggagaa
atcctgcgcactcagatgttggtgacgactccagagaagtgggatgtggtgaccaggaag
agtgtgggcgatgtggctttatctcaggtggtccgtctgctgatcctggatgaagttcat
ctcctgcatgaggatagagggcccgttctggagagcctggtggcccggacgctgcgccag
gtggagtcgacccagagtatgatccgaatacttggtctctctgcaactttgccaaattac
ctggacgtggcgtctttcctccacgtgaaccctttcattggattgttctactttgacagc
cgttttcgtcctgttcctcttggccagagcttcgttggcatcaagactacaaataaggtc
cagcagctgcacgacatggaggaggtttgttatgaaaaagtcctgaagcagattaaagcg
ggtcaccaggtgatggtgtttgtgcatgcacgaaactccaccgtccgcaccgccatgagt
ctcatcgagatggccaaaaacagaggagaactgtccttctttcaggtcgaccagggtcca
gactacggccagtgtgagaaacagattcagcgctccaggaataagcagatgcgggagatg
tttcctgatgggttcgggattcatcatgctgggatgctgcgtcaggaccgctcgctgatg
gagagcatgttttccagaggatacctgaagactctagtgtgcaccgccacgctggcctgg
ggagtcaacctgccggcacatgccgtcatcatcaagggcactaatatctacgatgcgaag
cgtggagctctggtggatctgggcatcctggatgttatgcagatctttggtcgcgccgga
cggccacagtttgataaatacggagagggaaccatcatcacaacacacgacaaactcagc
cattacctgacactgctgacccagcagaaccccatcgagagtcagttccagcagagcctc
gctgacaaccttaatgctgagatcgctctcgggacggtcactaatgttgacgaagccgtc
cgctggttgagctacacctacctgtacgtgcgaatgagagccaatccactggcttatggg
atcaaccacaaggcctatcagatggacccgcagctggagctctacaggaaggagctagtg
gtggagtccggcaggaagctggataaagcacggatgatccgattcgacgagaggacgggt
tacttcgcatctacagacctcggcaggacagccagtcacttctacattaaatacaacacc
atagagtcgttcaatgagctgttcaatgcacagaacactgaagcagacgtgctcagcatc
gtctccaaagctgaagagtttgagcagatcaaggtgcgggatgaggagctggaggagctt
gagaagatgttgtgtaatttctgtgagttgccggcgtctggaggagtggagaacggctac
ggcaagatcaacatcctgctgcagacctacatcagccgtggagaagtggacagtttctca
ctcgtctctgacctgtcatatgtagcgcagaacgcagctcgtatcatgcgggctctgttt
gagatggctctgaggaagcgctggcccgccatgacctaccgcttgctgaatctgtgtaag
gtgatggacaagcgtctgtggggctggactcacccgctcagacagttcaacacactgccg
gcttcagcactggcccggatggaggacaagaacctcaccatcgacaaactccgagatatg
ggcaaagacgagatcggtcacatgctgcatcacgtgaacatcggtctgaaagtgaagcag
tgtgttcatcagattcccgccatcctgctggagtccagcattcagccaatcacccgcacc
gtcctgcgcgtccgcctcagcatcactccagacttcaggtggaatgaccaggtccacggt
tcagttggagagccctggtggttatgggtagaggatcccatcaatgaccacatctaccac
tctgagtacttcctgctgcagaagaaacaggttgtgagtggagagccgcagcaggtggtc
ttcaccatccccatctttgagcccatgccttctcagtattacatccgcgccgtgtctgac
cgctggctgggctctgaagccgtgtgtatcatcaacttccagcacctcattctgccagaa
agacacccgccacacacagaactcttggatcttcagccattgccgattactgcattggga
aacatcgagtatgagagcctatacaagttcacacactacaatcccattcagacgcagatc
ttccacacgctctaccacacagacaccaatgtcctgctgggggctcctaccggctccggc
aaaaccatcgctgcggagatggccatattcagagtcttcaacgtgtaccccacctcaaag
gtggtctacatcgctcctctcaaagctctggttcgagagagaatcgaagactggaagatc
agaatagaagagaagcttgggagaaaggtggtcgagttaactggtgacaatacaccagac
atgcgagctatagctcaggctgacctgatcgtcacgactccagagaagtgggacggagtg
agccgcagctggcagaaccgcagctatgtgcagaaagtggccattctcatcattgacgag
atccatcttctgggtgaagaccgagggccggttcttgaagtcattgtgtccagaaccaac
tttatttcatcgcacacctcaaaaagagtcagagtagtcggactgtccaccgcgctggct
aatgcacgagatctagccgactggctgggcatcggacaggtgggactgtttaatttccga
ccctctgttcgcccggtgccattggaggttcatatccagggctttccaggacagcattat
tgccctagaatggccaccatgaacaaaccagttttccaagcaatccgcacccattctcct
gccaaacccgtcctgatattcgtgtcgtcccgccggcagacgcgtctcacagctcttgac
ctcattgcctttctggctactgaagacgaccccaaacagtggctccaccaggacgagaga
gagatgaccgacatcatcgccactgtcagagagtcgaacctgaagctgacgctggcgttt
gggatcgggatgcatcacgcaggccttcacgagcgggacaggaagaccgtggaggaactc
ttcgtcaactgtaagattcaggtgttaattgcgacgagcacactggcatggggcgtcaac
tttcctgcccacctggtgatcgtgaagggcacagaatactatgacggaaagaccaggcgc
tacgtggattaccccataacagatgttctccagatgatggggcgggcagggcgaccgcag
ttcgacgaccagggcaaggctgttatccttgtgcacgacatcaagaaggacttttataag
aagttcctctacgagccgttccctgtggagtctagtcttcttagtgtgctctccgaccac
ttgaatgcagaaatcgcagcaggcacggtcacctcaaagcaggacgccatggattacatc
acttggacgtatttcttccgcagactggtcatgaaccccagctactataatttggacgac
atcagccatgaaaccattaataaatacctgtcgaacctggtggagaggagtctgagggat
ctggaatgttcttactgcatggagatacaacaggacgagcaaaccatcgagcccctgaca
tacggccgcatttcatcctattattacctgaaacaccagaccatccgcatgttcaaagag
cgcctgaagccggagtgccggtcccacgagctgctggccatcctgtcggtgatgcatgtg
ttgtgtctgcaggctatgctggatgtggtggcgaatgaaggctggcttgtgtctgcgctg
agtctctgtaatctggtccagatgatcatccaggcccgatggctgcacgattcctccctg
ctcacactccctcacatccagaagcaggagctctatgtcttcaggaggtggagctccaga
ggtgtgagggctggatgtggtcaccaaggcccaatcgagggtcttcctgagctgatggca
gcctgtgatggaaaagaggacatctttacgtctatggtgaaggaagtgctgcaacccaat
cagatctctcaggcctggctgtacgtgagtcagctgccggtgctggagctcagtctgagt
gtgaagggattctgggaaaactctgtagagcagacagagcgagcgattcctgctcaggtg
tccagcatccgagaggagtccagctggctgccactgcatgcggatcaggagtacgtcctg
caggtgtccatgcgcaggctcaatgcaggacagcacaggaggaagcaggacagcagagct
caggcgccgcgtttccccaaacctaaagatgaaggctggtttctggtcctcggggaggtg
gagaagaaagagctgctggccatcaagcgtgtggggtttgttcgcaatcacagcagcgtg
tctgtggccttctacactcctgagaaaactggaaagtgtatctacacgctgtacctgatg
agcgacagttacctgggcctggatcagcagtacgacatccatctcaatgtcatcccggcc
agcattgctgcacaagtcaacagcgaagtagcggatagtgttggtaaactggccctgcgg
tga
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integrated database retrieval system
