Danio aesculapii (panther danio): 130248020
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Entry
130248020 CDS
T11734
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
daes Danio aesculapii (panther danio)
Pathway
daes03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130248020 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daes03019
]
130248020 (tprb)
Messenger RNA biogenesis [BR:
daes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130248020 (tprb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Nucleoprot-TPR
TPR
Motif
Other DBs
NCBI-GeneID:
130248020
NCBI-ProteinID:
XP_056337511
LinkDB
All DBs
Position
20:complement(34975890..35001048)
Genome browser
AA seq
2350 aa
AA seq
DB search
MAAVLQQILERSEISKLQKTVLTKLEKYISEQQCEVDDLKAQQEQFRVDSEQQYFDIEKK
FAESQAQFVSQTQEHQILKEEHCKLEDELKCLRENNKEQAASYTKLESEQNDLSKAKDEL
EAEKRELVRTLERRSQEMEHQSEDLKRLNDRLVEVSAEKMQLQLKLEESETSEVSIKYKE
KRMEQEKGLLQSQVTWLNTELKAKSEELLSLSRQRGNEILELQCNLNNKEDEITRLQDQV
TSLKASNENFQKQAEEMIIKMREAKEQQAALEEKFSNELNANIKLSNLYKGAAADAEAKS
EELSRAVDELHKLLKEAGEAHKALEVKMADLESHKNKEIAELKEKINSQEKELDNANDLL
SDSRHRGAASVLIEEQVTTMSPTAAAVAKIIKPGMKLTEIYTAYVETQEQLQSEKLENKR
LHKYLDDIVQEMEAKAPILKRQREEYERMQKSVSSLSAKLEQAVMEVHRLQKESDESNKR
ASVLDRDNQRFEIQLADMAQQVRVLLVELEEARGNHVIREDDEVGSADVSSTSEVISQHL
VTFRSVEELQQQNQRLLVALRDLSEEKEKDELEGDTMKRSEVEKYLEELQRELEQLKEKR
TQDLQKVDTVARQRDMFRMLLTQTTGVTFPQGAGAEELMLTSTPRRSPAVTPTTGTPTAL
VATAIESTESVEAKAALKQLQEVFVAYKKEKIESEKGQTEQNEKLQDQVTELRSENMKIS
TQLEFTSKRYEMLQDNVEGYRKDIASLNEKLQKQAAAIKQSEQTTHTLTQDRQTAAEKLS
IAESELENLRKERDMLKLVEIRLTQEKESFQAQQLGQNMLLTNLKLIQTTLERSETETRQ
RLTAQIEKQEREITQLQKRLENEVEQKHLLARNQDVQLLDTKKQLETQIAQHHKTREQLS
AAQLELTNLRLQLNSGESRLASPAVHTGLQGSERDMEALRTQIRQTENRIEELTERLKNT
TASMEQYKAMSLSLEESLDKEKQVTEQVRSSVENQVEAAQEKYKQLEQKMLEMDKEKQNL
LEEKSKAVAAVEQELSELRKSLSSVQAELQCTQEKEAVAVAQEQQALLDGQEQAKMAAEA
QDKYEREMLLHAADVEALQAAKAQAQQAALVRQQLEEKVQITSAQLLEARVSWEEQEKIL
KEEQCKIQSRCENLQRQNKLLHEQIQTLSGQMASQLKRATTESPLNVSLTEEGKSQEQLL
EILRFVRREKEIAESRFEVVQGESLRHRLRVEHLERELKDVQESLNAERERMQVTAKTLA
QHDELMKKTETMNVLMETNKMLREEKEKLEKQLQDTQAKIRKLESDIMPVQESNSELSEK
SGMLQAEKKLLEEDIKRWKARTQHLVTQQKDTDPEEYKRLHSEREAHLKRIQQLVEETGR
LKADAARSSGSLTTLQSQVQNLRENLGKVMVERDNLKKDQEAKILDIQEKLKTITQVKKI
GRRYKTQYEELKVEYEKLVAAAASAPVQEQEAQQASAQELQNLKESLNQSEIRIRELEGQ
LENLNRTVGEREMEARSAQEQASRLQAELTRLRQELQEKSSQEERLKQQLTEKEERTKKA
ILLAKQKISQLTGIKGQFQKENEELKQQKEELEVRVSALKSQYEGRLSRQERELRDLREQ
QERHGEQRDEPQEQGSSKTQEPQRTTEQRQISLKTTPAAERGSASTSDPPTANIKPTPLA
ATPSKPQVIPGNKSTPRASIKPMITPAPVPTPTPTATVMPTTQVESQEPMQSSESPLEHV
TVYGSASGSVRSTSPNVQTTLTQPLLNVQQQSQATAFIQPTQQQTQPPAEPSNQEPPAAV
MLPTSQLDRPLSTSTGLWSATPSTSSASAVSASPSSALSKRPREEEQESMSADTQSQDEP
NDSPICKRLRIHRVGLEEEMLAEDSTEAESVVPGEIQEAPDAGQELENYSTLEEMDEEPG
PSQSVPGDRILPHPSETHRSPEEPDHHVIVIVSDTESEGEQEEESEEEEEEEEEEQDYEE
EDEEEEEEDDDDEEDGGIGEEGEESNEESRDDNEAYEGDDTEGPDPTDPGTETEESLGAT
DSTQRMADSQSFESNTLEMFDAPVTSSAPRPPQSPRRPQHPLPPRLNILAVPSQELGPPS
QVQRLPARRQSVGRGLQLAPGMASSAQPFFDDDDRMVPSTPTLPLRSDGFVEAIHSPQVA
GVPRFRFGLSDELPQTSSSHSDLSQLPSQGLGMYESSVYLGSHEDESGGRSVPTTPLQIS
APVTILSEAAVSEASEHASQSVPMVSTSTPGLSAPAVEERDDMFLDAGDSAEASLEAVSQ
TEAEEAAQPSDDASLPSTSQEPSSSSADTSSQPPKARSGSGRQWTGSRGSRSIVKRDGLS
VMGVRGRFAR
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgttgcagcagatacttgagcggtcggagatatcgaaactccaaaaaact
gttttgactaaattagagaagtacatttctgagcagcaatgtgaagttgatgacctcaag
gcacaacaggagcaatttcgtgtggatagcgaacaacagtattttgacatcgagaagaag
ttcgcagagagtcaggctcagtttgtgtcccagactcaagaacatcagatcctgaaagaa
gagcactgtaaattggaggatgaactgaaatgtttaagagagaacaataaggagcaagca
gcttcatacaccaaactagaatctgaacagaatgacctttccaaagccaaagatgagctc
gaagcagaaaaacgagagctggtccgcacactggaaagaagatctcaggagatggaacac
caaagcgaggaccttaagcgtcttaatgatcgattggtggaggtcagtgcagaaaaaatg
cagcttcagctcaaactggaggagtcagaaacctctgaagtctcaatcaagtataaggag
aaacgaatggagcaggagaaaggtctactccagtctcaagtgacctggctgaacaccgaa
cttaaggccaagagtgaagaactgctgtctctgtcccggcagagaggcaacgagatcttg
gagctccagtgtaaccttaataacaaagaggatgagatcacccgcctccaagatcaggtg
accagtctgaaggcatccaatgagaactttcagaagcaagcagaggagatgatcattaag
atgagagaggcaaaagaacagcaagccgctttggaagaaaagttcagtaatgagctcaat
gccaacatcaagctctcaaatctgtacaagggagcagcagctgatgctgaggccaagagt
gaggagctcagcagagctgttgatgagcttcataagctgctcaaagaggctggagaggca
cacaaagctctggaagtaaagatggcagatctggaaagtcataagaataaggaaattgct
gaacttaaagaaaaaataaacagtcaggaaaaagagctggacaatgctaatgacttgttg
tctgacagcagacacagaggagctgcttcagttcttatagaagagcaggtgaccacaatg
tcccccactgctgctgcagttgccaaaattatcaaaccaggcatgaaactcacagagata
tatactgcatacgtggagacccaagaacagttacagagtgaaaaactggagaacaagcga
ctgcacaagtacctggatgacattgtgcaggagatggaagcaaaggctcctatactgaaa
agacagagagaagagtatgagcgcatgcagaaatcagtttccagtctctctgctaaatta
gagcaagctgtcatggaggtccatcgcttgcagaaggaatccgatgaaagcaacaagcgt
gcatcagtcttggatagagataaccagaggtttgagattcagctggctgacatggctcaa
caggtgcgggtccttctcgttgagttggaggaagcacgtggtaaccatgtgatacgggag
gatgatgaggtgggttcggcagatgtgagcagcacatcagaggtgatttctcagcacctg
gtcaccttccgtagcgttgaagagctgcagcagcagaaccagcgactcctagtggccctc
agagaccttagcgaggaaaaggagaaggatgaattggagggagacaccatgaaacgcagt
gaagtggagaaatatctcgaggagcttcagcgagagttggagcagctgaaggaaaagaga
actcaggatctgcagaaggttgacactgtggcacgacagagggacatgttccgcatgctt
ctgactcagaccactggagtcactttcccgcagggtgctggtgctgaggaacttatgctg
acctctacgcctcgtcgctctccagccgttacacccaccaccggcacccctacagcactg
gttgccacagccatagaatccactgagtcagttgaggccaaggctgcactgaagcagctt
caggaggtctttgtggcctataagaaggagaaaattgagtctgaaaagggacaaactgag
caaaatgagaaactgcaggatcaagttaccgaacttcgctcagagaacatgaaaatctcc
acacagctggagttcacctccaaaagatatgagatgctccaggataatgttgagggctat
cgtaaggatattgcctctctgaatgagaagcttcagaaacaggctgcagcaattaagcag
agtgaacagaccacgcacaccctcacacaggaccgacaaacagcagctgagaaactctct
attgctgagtctgaattagagaacctgcgtaaagagagggatatgttgaagctagtggag
atcagactgacccaggagaaagagtccttccaggcccaacagctcggccaaaacatgctg
ctgaccaacctcaaattaatacagactactctagagcgttctgagacggagaccagacaa
cggctgactgctcagattgagaagcaggagcgagagatcacccagctgcagaagagactt
gagaatgaggtggagcagaagcacctgctggcacggaatcaagatgtacagctgctggac
actaagaagcagctagaaacacagattgctcagcaccacaagacaagagaacagcttagt
gctgcacagcttgagttaaccaacctgagactgcagttgaatagcggggagagccggctg
gcgtcccctgcagtacatacaggcctgcagggcagtgagagagacatggaggctctgcgt
acacagataagacagactgagaacaggattgaagaactgaccgagcgacttaaaaacacc
actgccagtatggagcaatacaaggctatgagtcttagcctggaggagtctttagataaa
gagaagcaggtaactgagcaggttcgctcatctgtggaaaaccaagtggaggcagctcag
gagaagtataaacagctggagcaaaaaatgctggaaatggacaaggagaaacagaacctg
ctggaagagaagagcaaagctgttgctgctgtagagcaagagctgagcgagctgagaaag
tctctcagcagtgtgcaggcagagctccagtgtacccaggagaaagaagctgttgctgtg
gcacaggagcagcaggccttactggatggtcaggagcaggctaagatggcagctgaggca
caggataaatatgagagggagatgttactgcatgccgcagatgtggaggctctgcaggct
gccaaagctcaggctcaacaggcggctcttgtcagacagcagctggaggagaaagttcag
atcaccagcgcacaactgctagaggctcgtgtgtcctgggaggaacaagagaagattctt
aaggaggagcagtgtaagatccagtcccgctgtgaaaatctgcagaggcagaacaaactc
ctccatgagcagatccagactttgagtggacagatggcaagtcagctgaagcgagccacc
actgagagtccactcaacgtctctctgactgaagaaggaaagtcacaggagcagcttctg
gaaatactcaggtttgtgcgcagagagaaggagatcgcagagtctcgatttgaggtggtc
cagggggagagtctgaggcacaggctgagagtagagcatctggagagagagctgaaggat
gtgcaagagagtctgaatgcagagagagagaggatgcaggtgactgcaaagactctagcc
cagcacgatgagctgatgaagaaaacagagaccatgaatgttctaatggagaccaataag
atgctgagagaggagaaggaaaaactagagaaacagttgcaggatactcaagccaagata
cgtaaactagagtcagacatcatgccggtgcaggagtccaattcagagctgagtgagaag
agtggtatgcttcaggcagagaagaaacttctggaagaagacatcaaacgctggaaagct
cgcactcagcacctggtgacccagcaaaaagacactgacccagaagagtacaagcgtctg
cactctgagcgggaagcacatctcaaacgcatccagcaactcgttgaagaaactggccga
ctcaaagctgatgctgccaggagcagtggctctttgactacgctgcagtctcaggtgcag
aacctaagggagaaccttggaaaggtgatggtggagagggacaacctgaagaaagaccag
gaggccaaaatactggacatccaggagaaactgaaaaccatcacacaagttaaaaaaatt
ggtcgtcgttataaaacccaatatgaggagcttaaggttgaatatgaaaagttggtagca
gcggcggcatctgcaccagtccaggaacaggaagcacagcaggcatcagctcaagagctt
cagaaccttaaagagtccctcaatcaatcagagatcaggataagagaactggaaggccaa
ctagagaatctcaatagaactgtaggcgagcgagaaatggaggcccgcagtgcgcaggaa
caggcctctcgtttgcaggcagagttaacacgtctcagacaggagcttcaggagaaatca
tctcaggaggagcgtctcaaacagcagctgactgaaaaggaagagaggaccaagaaggcc
atattattggccaagcagaagatcagtcagcttactggtataaaaggacaatttcagaaa
gagaatgaggagctgaagcaacaaaaagaggagttggaagtgcgtgtgagtgcgctgaag
tctcagtatgaggggcgtctgagcagacaggaaagggagctacgagaccttcgcgagcag
caggaaagacatggagaacagagggacgaaccacaagagcagggctccagcaagacccag
gaaccacaaaggacgacagaacagcgacagatttctctgaagacaacaccagcggcagaa
agaggaagtgctagcacttcagatcccccaacagccaatataaagcctacacctctggcg
gcaacccccagcaagcctcaagtcattcctggaaacaaatccactccaagagccagcatc
aagcccatgatcactcctgccccggtgcccactcctacacccactgctacagtcatgccc
accacacaggtggagagccaagagcccatgcagtcctccgagtccccattagagcatgtg
actgtgtatggcagtgccagtggttccgtacggtccaccagccctaatgttcagaccaca
ctgactcagcctctgctgaatgttcaacagcagagccaagccactgcattcatccagccc
acccaacaacaaacccaaccccctgctgaaccgtccaatcaggagcccccagctgctgta
atgctgccaacctcacagttagacaggcctctttctacatccacagggctctggagcgcc
acccctagcacaagcagtgccagtgcagtgtctgcatctcctagtagtgccttaagcaaa
cgcccccgtgaagaggaacaagagagcatgtctgctgacacgcagtcccaagatgagccc
aatgactctcctatttgcaaaaggctccgcattcatagagttgggctggaggaagagatg
ttagctgaggacagcactgaggctgaaagtgttgtaccgggtgagattcaggaggcccct
gatgctggacaggagctggagaactactctactctggaagaaatggatgaggaaccagga
ccatctcagtctgtccctggagatcgaatactgccccatccatctgagacccatcgaagc
ccagaggagcccgatcaccacgtcatagtcattgttagtgacactgagagcgaaggagaa
caggaagaggagtctgaggaggaggaggaggaagaggaagaagagcaggattatgaggag
gaggatgaggaagaggaggaggaagatgatgacgatgaagaggatggagggattggggaa
gagggagaagaaagcaatgaggagagcagagatgacaatgaggcctacgaaggagatgac
acagagggccctgatcccactgatccgggcactgagacagaagaaagtcttggagcaaca
gactccactcagcgcatggcagattcccagagctttgaatctaacacattggaaatgttt
gacgcccccgtcaccagctctgctcctcgacctccacagtccccaagaaggcctcaacat
cctctgccacctcgactgaacatcttggctgttccttctcaggaactcgggcctccttct
caagtccagcgtctcccagctcgccggcagtcagtgggacgaggccttcagcttgctcct
ggaatggccagtagtgcacagcctttctttgatgatgatgacaggatggttcccagcact
cctacacttcctcttcgctctgatggattcgtagaagccatacattctccacaggtggca
ggtgtaccacgctttcggttcgggctttcagatgagctcccgcagaccagctcctctcac
tcagacctcagccagctgccctcacaaggtttaggcatgtatgagagctccgtttacttg
ggatctcatgaggatgagtcggggggacgcagtgtacccacaacccctctgcagatcagc
gctcctgtgacgattctctcagaggctgctgtatctgaagcaagtgaacatgcttctcag
tctgtgccgatggtgagcacctctacaccaggcctcagtgctccagcagtggaggagaga
gacgacatgttcctggatgcaggagacagtgctgaagcttcacttgaggccgtgtctcag
actgaggcagaagaagcagcgcagccttcagatgatgccagtctgccttctacaagccag
gaaccatcatctagttcagcagacacgagctctcagcctcctaaagccagaagcggctct
ggcagacagtggactggaagtcgaggttctagaagcattgtgaagagggatggactgagc
gtcatgggtgtgagaggacgctttgccagatga
DBGET
integrated database retrieval system
