Desulfocurvibacter africanus subsp. africanus: Desaf_0104
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Entry
Desaf_0104 CDS
T01662
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
daf
Desulfocurvibacter africanus subsp. africanus
Pathway
daf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
daf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Desaf_0104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daf03019
]
Desaf_0104
03110 Chaperones and folding catalysts [BR:
daf03110
]
Desaf_0104
03029 Mitochondrial biogenesis [BR:
daf03029
]
Desaf_0104
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
daf04147
]
Desaf_0104
Enzymes [BR:
daf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Desaf_0104
Messenger RNA biogenesis [BR:
daf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Desaf_0104
Chaperones and folding catalysts [BR:
daf03110
]
Heat shock proteins
HSP60 / Chaperonin
Desaf_0104
Mitochondrial biogenesis [BR:
daf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Desaf_0104
Exosome [BR:
daf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Desaf_0104
Exosomal proteins of other body fluids (saliva and urine)
Desaf_0104
Exosomal proteins of breast cancer cells
Desaf_0104
Exosomal proteins of colorectal cancer cells
Desaf_0104
Exosomal proteins of bladder cancer cells
Desaf_0104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
REF
Motif
Other DBs
NCBI-ProteinID:
EGJ48464
UniProt:
F3YTT3
LinkDB
All DBs
Position
complement(111225..112874)
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKEILFDARAREKMKRGVDKLANAVKVTLGPKGRNVVIEKSFGAPTITKDGVTVAKEI
ELEDKFENMGAQMVKEVASKTSDVAGDGTTTATILAQSVFTEGVKLVAAGRNPMAIKRGV
DKAVEAIVAELAKMTKPTRDQKEIAQVGTISANNDPTIGNIIADAMGKVGKEGVITVEEA
KGLETTLDVVEGMQFDRGYLSPYFVNDPEKMVCEMAEPLILINEKKISNMKDLLPVLEQV
ARAGKPLVIIAEDIEGEALATLVVNKLRGTLNTVAVKAPGFGERRKAMLQDIAILTGGTV
VSEDLGVKLESISINQLGSAKRVSIDKENTTIVDGAGKAEDIKARVAQIRREIDETTSDY
DREKLQERLAKIVGGVAVINVGAATEVEMKEKKARVEDALNATRAAVEEGIVPGGGVALV
RCAKVLANVKTVDDDESAGVALVRRAIEEPLRQISNNAGMEGSIVVEKVREGGKDGYGFN
AATGEYEDLIKAGVIDPKKVTRIALQNAASVAGLLLTTECAIAEKPKEDKGAPAMPGGMG
GMGGMGGMY
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaagaaatactttttgatgctcgtgcccgcgagaagatgaagcgtggagtg
gacaagctggccaatgccgtcaaggtgaccctcggacccaagggccgcaacgtggtcatc
gagaagagcttcggcgctccgaccatcaccaaggacggcgtgaccgtggccaaggaaatc
gagcttgaggacaagttcgagaacatgggcgcccagatggtcaaggaagtcgcctccaag
acttccgacgttgccggcgacggcaccaccacggcgaccatcctggcccagtccgtgttc
accgagggcgtcaagctcgtggccgccggccgtaatcccatggccatcaagcgtggcgtg
gacaaggccgtcgaggccattgtcgcggagctggccaagatgaccaagcccacccgcgac
cagaaagaaatcgcccaggtcggcaccatctccgccaacaacgatcccaccattggcaac
atcatcgccgacgccatgggcaaggttggcaaggaaggcgtcatcaccgtcgaggaggcc
aagggcctggagacgaccctcgacgtggtcgaaggcatgcagttcgaccgcggctacctc
tcgccttacttcgtcaacgaccccgagaagatggtctgcgagatggccgagccgctcatt
ctcatcaatgagaagaagatttccaacatgaaggacctgctgcccgtgctcgagcaggtg
gcccgcgccggcaagccgctggtcatcatcgccgaggacatcgagggcgaggccctggcc
accctggtggtcaacaagctgcgcggcaccctgaacaccgtggccgtcaaggctcccggt
ttcggcgagcgccgcaaggccatgctgcaggatatcgccatcctcaccggcggcaccgtg
gtctccgaggacctgggcgtgaagctggagagcatctccatcaatcagctgggcagcgcc
aagcgcgtctcgattgacaaggagaacaccaccatcgtcgacggcgccggcaaggccgag
gacatcaaggcccgcgtggcccagatccgccgcgagatcgatgagaccacctccgactac
gatcgcgagaagcttcaggagcgtctggccaagatcgtgggcggcgtggccgtcatcaac
gtgggcgctgccacggaagtggagatgaaggagaagaaggcccgcgtcgaggacgccctg
aacgccacccgcgctgccgtcgaagagggcatcgtgcctggcggcggtgtggccctggtg
cgttgcgccaaggtcctggcgaacgtgaagaccgtggatgacgacgagtccgccggtgtg
gccctggttcgtcgcgccatcgaggagcctctgcgccagatctccaacaacgccggcatg
gaaggctccatcgtggtggagaaggtccgtgagggcggcaaggacggctacggcttcaac
gccgccaccggcgagtacgaagacctcatcaaggccggcgtcatcgaccccaagaaggtc
acgcgcatcgccctgcagaacgccgcctccgtggccggcctgctgctgaccaccgagtgc
gccatcgccgagaagcccaaggaagacaagggcgcccccgccatgcccggcggcatgggc
ggcatgggcggcatgggcggcatgtactag
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