Desulfocurvibacter africanus subsp. africanus: Desaf_0310
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Entry
Desaf_0310 CDS
T01662
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
daf
Desulfocurvibacter africanus subsp. africanus
Brite
KEGG Orthology (KO) [BR:
daf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
daf03032
]
Desaf_0310
03400 DNA repair and recombination proteins [BR:
daf03400
]
Desaf_0310
Enzymes [BR:
daf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Desaf_0310
DNA replication proteins [BR:
daf03032
]
Prokaryotic type
DNA Topoisomerases
Desaf_0310
DNA repair and recombination proteins [BR:
daf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Desaf_0310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
SnAC
Motif
Other DBs
NCBI-ProteinID:
EGJ48667
UniProt:
F3YU61
LinkDB
All DBs
Position
complement(335483..336592)
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AA seq
369 aa
AA seq
DB search
MAQSSYELERNHPEAREVLRFSSDQEPGLRRVRKGKGFAFFDSEGRLVTDQEIKAAIRLL
AIPPAWTDVWICADRKGHIQATGRDARGRKQYLYHSAWTEERSRTKFRELAAFARVLPDL
RRAVDRDLSRPGLPRRKVLALVIKLMEETMVRVGNPEYAQRNKTYGLTTLRDGHLDESCF
PLCLRFPAKGGRERQVRVASRKLAALVRRCQELPGQHLFAYEDGQGVHAVGSRDVNEYLR
EVGGPSVTAKVFRTWGATVLAARELSAMEPPASQTDGKHNVAAAMRKVAARLGNTPAVAR
ASYVHPAVVSAFLHGRLCVNADAMYAHGNAGLLPAEVAVARLLASREDRRNDADAQGGEP
CPMQSGKEP
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcccaatccagttacgaactcgagcgcaaccatccagaagcaagggaagtcctgcgg
ttctcttcggatcaggagccaggcttgcgccgcgtgcgcaaaggcaagggcttcgccttt
ttcgacagcgagggcaggctggtgaccgaccaagaaataaaagcggccatccgtttgctg
gctatcccacctgcctggaccgacgtgtggatttgcgcggatcgcaaggggcatatccag
gccacgggccgtgatgcgcgtggccgcaagcagtacctgtatcattccgcctggaccgag
gagcgcagccgcaccaagttccgcgaactggcagcttttgcccgcgtcttgccggacctt
cggcgcgccgtggaccgcgatctttctcgtcctggcctgccgcgacgcaaggttctggct
ctggtgatcaagctcatggaggagaccatggtccgcgtgggcaacccggagtacgcgcag
agaaacaagacgtatggattgacgaccctgcgcgacggtcacctagacgagagctgcttt
ccgctgtgtctgcgctttccggccaagggcggccgggaacggcaggtgcgcgtggcgagc
cgcaagctcgccgccctggtgcggcgctgccaggaattgccgggtcagcatctcttcgcc
tacgaggacgggcagggcgtgcatgcggtgggctcccgggacgtgaacgagtacctgcgc
gaggtcggcgggcccagcgtcacagccaaagttttccgcacgtggggcgcaacggtattg
gccgcgcgcgagttgtcggccatggagccgccagcgagccagaccgacggcaagcacaat
gtcgcggcggccatgcgcaaggtcgccgccagactgggcaacacgccggcagtcgcccga
gcatcctatgtgcatccagcagtggtgagcgcttttctgcatgggcggctttgcgtgaac
gccgatgcgatgtatgctcacggcaatgccgggctcttgcccgcggaagtggccgtggcg
cgcctgctcgcgagcagggaggaccggcgtaacgatgccgatgcgcaaggaggcgagcca
tgccccatgcagtctggaaaggagccctga
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