Desulfocurvibacter africanus subsp. africanus: Desaf_0404
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Entry
Desaf_0404 CDS
T01662
Name
(GenBank) DNA polymerase III, delta prime subunit, putative
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
daf
Desulfocurvibacter africanus subsp. africanus
Pathway
daf03030
DNA replication
daf03430
Mismatch repair
daf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
daf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Desaf_0404
03430 Mismatch repair
Desaf_0404
03440 Homologous recombination
Desaf_0404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
daf03032
]
Desaf_0404
03400 DNA repair and recombination proteins [BR:
daf03400
]
Desaf_0404
Enzymes [BR:
daf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Desaf_0404
DNA replication proteins [BR:
daf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Desaf_0404
DNA repair and recombination proteins [BR:
daf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Desaf_0404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
YAcAr
Motif
Other DBs
NCBI-ProteinID:
EGJ48759
UniProt:
F3YVM3
LinkDB
All DBs
Position
439517..440431
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AA seq
304 aa
AA seq
DB search
MRDPLTIPARQERVRAFLDRLGATPPQVLLLEGGHDPEREALALYWACLLNCARSLACKS
DQPVQTALLAPAGQPKVEPCGACPECVQILEQVHRDLVFIDGRTESIKIDMVRELRSLMG
EPPRGQGKRVIVLFEAQALQPEAANFLLKSMEEPRPGNVFVLTAPQRERLLPTLVSRSFV
LTLAWPEVWEAEPVVGEGENASEWAGAMGEFWRTGRGWFERASDKGRLDAPLAARVLVEC
QRALAGALSGREEFGQSLRGLGPESLRRLDAALDMAQECLEYRVNPALTLDWLAVTGFSL
TRGQ
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgatcccctgacaattcccgcgcggcaggaacgcgtgcgcgcctttctggaccgc
ttgggcgcgactccgccgcaagtcctgctcctggagggcggccacgatcccgagcgcgag
gctctggccctgtattgggcctgtctcctcaactgcgcgcgctccctggcttgcaagtcg
gatcagccggtccaaaccgcgctgctcgctccggctggtcagcccaaggtcgaaccttgc
ggcgcatgccccgagtgcgtgcagatcctggagcaggtccaccgcgatctcgtgttcatc
gacggccggaccgagagcatcaagatagacatggtccgcgagctgcgctcgctcatgggc
gagccgcccaggggccaaggcaagcgggtcatagtgcttttcgaagctcaggccctgcag
cccgaggcagccaacttcctgctcaagtccatggaggagcccaggccgggcaacgtgttc
gtgcttaccgcgccgcaacgcgagcgactgctgcccacgctcgtctcgcgcagcttcgtg
ctgaccctggcctggcccgaggtctgggaagccgaacccgtggtcggcgaaggcgagaac
gcgtccgaatgggcaggcgccatgggcgagttctggcgcactggacgcggctggttcgag
cgtgcctctgacaagggccgtctggatgcccctcttgccgcccgcgtgctcgtggagtgc
cagcgcgccttggccggcgcattgtcgggccgtgaagaattcggccagagcctgcggggt
ctcggccccgagtccctgcgccggctcgatgccgccttggacatggcccaggaatgcctg
gaatacagggtcaatccggctctgaccttagactggctggccgtaaccggcttttccctg
acgcgagggcaataa
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