Desulfocurvibacter africanus subsp. africanus: Desaf_0574
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Entry
Desaf_0574 CDS
T01662
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
daf
Desulfocurvibacter africanus subsp. africanus
Pathway
daf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
daf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Desaf_0574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daf03400
]
Desaf_0574
Enzymes [BR:
daf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Desaf_0574
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Desaf_0574
DNA repair and recombination proteins [BR:
daf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Desaf_0574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF7351
Anti-TRAP
Zn_ribbon_FGT1_1
Motif
Other DBs
NCBI-ProteinID:
EGJ48927
UniProt:
F3YVW9
LinkDB
All DBs
Position
complement(642917..643816)
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AA seq
299 aa
AA seq
DB search
MPELPEVETIARGLAPDVQGRLIAEVEVRYSGAVCQSAGPGTTRKTTAPEKGRAFADLVR
GRRVDKVWRRAKLLVFDLGPKNAAESGADKVSPADLHLVFHLKMTGSVWLPPSGAQPDAH
THIVFTLDNGTKVHFRDIRKFGWCLALTGEELRSMPFFAALGPEPLEIGEKDFVALFKGR
KAGMKALLLDQEIIAGIGNIYADESLFRSGIHPRTKAADVPEAKLRTLHRELQAVLRQAI
AENGSTFSDYRTAQGDAGAFQNRFLVYGRAGEKCVKCGGTLQSEVVAGRTSVFCPKCQK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagttgcccgaagtcgaaaccatcgctcgcggacttgccccggatgtccagggc
cgcctcatcgccgaggtcgaggtgcgctattccggcgcggtctgccagtccgccggaccg
ggcacgacccgcaagaccacggctcccgaaaagggccgggcctttgccgacctcgtgcgt
ggccggcgcgtggacaaggtctggcgcagggccaagctgctcgtgttcgatctcggaccc
aagaacgctgctgaatccggcgcggataaggtctcgcccgccgatctgcacctcgttttc
cacctcaagatgaccggcagcgtctggctcccgccctcgggcgcgcagcccgacgcgcac
acgcacatcgtgttcaccctcgacaacggcacgaaggtccacttccgcgacatccgcaag
ttcggctggtgcctggccctgacgggagaggaactgcgctccatgcccttcttcgctgcc
ctggggccggagccgctggaaatcggggaaaaggacttcgtggcgctgttcaagggccgc
aaggcaggcatgaaggccctgctgctggaccaggagatcatcgccggcatcggcaacatc
tacgccgacgagtccctgttccgctccggcatccaccccagaaccaaggccgccgacgtg
cccgaggccaagctgcgtacactgcacagggagcttcaggccgtcctacgccaggccatc
gccgaaaacggctcgaccttttccgactaccgcacggcccagggcgacgcgggcgcgttc
cagaatcgtttcctggtctacggcagggcaggggagaagtgcgtgaagtgcggggggacg
ttgcagtcggaggtcgtggcggggcggacgagtgtgttctgtccaaagtgccagaaatag
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