Desulfocurvibacter africanus subsp. africanus: Desaf_1249
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Entry
Desaf_1249 CDS
T01662
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
daf
Desulfocurvibacter africanus subsp. africanus
Brite
KEGG Orthology (KO) [BR:
daf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
daf03032
]
Desaf_1249
03400 DNA repair and recombination proteins [BR:
daf03400
]
Desaf_1249
Enzymes [BR:
daf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Desaf_1249
DNA replication proteins [BR:
daf03032
]
Prokaryotic type
DNA Topoisomerases
Desaf_1249
DNA repair and recombination proteins [BR:
daf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Desaf_1249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Lar_restr_allev
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
EGJ49588
UniProt:
F3YYE4
LinkDB
All DBs
Position
complement(1379474..1381774)
Genome browser
AA seq
766 aa
AA seq
DB search
MAKNLIIVESPAKVKTIKKFLGRDYMVEASVGHVRDLPPNKIGVDEERGFTPDYKVIPGK
QKVVAKLKAAADQAEHIYLAPDPDREGEAIAWHVAHLIGDKNKQVSRIQFNEITSRAVKE
ALDNPRPLDENLFHSQQARRILDRLVGYKLSPLLWSKVKRGISAGRVQSVALRIIVDRER
ERQAFRPEEYWVFKALLEGPEPPAFAAELWKVEGKKPSVGSGEQAQVLYDRVKDTPFVVS
AIEEKERQRHPSPPFITSTLQQDASRRLGYTAKRTMSTAQRLYEGVELGESGVTALITYM
RTDSVRVADEARDAAQAFIVETLGADYYPPKPRYFKTKSGAQDAHEAIRPVDVRVTPESV
RKHLPADQYKLYTLIWQRFMASQMAAARLHDTTVTVDSGPAQWRAKGERVLFPGFLKVYG
VDEATDEKTEGEGGESTSTKAAMLPKLEKGMQLTVRKLTKDQKFTQPPPRYTEASLVKEL
EEQGIGRPSTYAAIISTLLDRDYARLEEKKFVPSELGVTVVDLLTKHFQSLMDVHFTAGM
EEQLDDVAGGKVNWVELLKHFTGDFYPTLDKAKDEMVQVKGGLETGIVCDLCGKPMNIRF
GKNGEFLGCSGYPDCKGIKNFTRDEQGQIQIVERANEMPEKVGTCPDCGKDLVLKRSRTG
SRFIACSGYPECKHAEPHSTGVTCPREGCTGQLVEKSSKRGKVFYSCSTYPKCNYATWDW
PIAKPCPQCDSKILTIKTTKARGEHVACPEKACRFTRELEPDESVG
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatctaatcatcgtcgagtcgccggccaaggtgaagaccatcaagaaattc
ctgggccgcgactatatggtcgaggcctcggtgggccacgtgcgcgacttgccgcccaac
aagatcggcgttgacgaggagcggggctttaccccggactacaaggtcatccccggcaag
cagaaggtcgtggccaagctcaaggccgccgccgaccaagccgaacatatctatctcgcg
cccgaccccgaccgcgagggcgaggccatcgcctggcatgtcgcccatcttataggcgac
aagaacaagcaggtcagccgcatccagttcaacgagatcaccagccgcgcggtcaaggag
gccctggacaaccccaggcccctggacgagaacctgttccactcgcagcaggcccggcgc
atcctggaccggctcgtgggctacaaactttcgccgctgctctggtccaaggtcaagcgc
ggcatctccgccggccgcgtgcagtccgtggccctgcgtatcatcgtggaccgcgagcgc
gagcgccaggcattccggcccgaggagtactgggtcttcaaggccctgctcgaaggaccc
gagccgccagccttcgcggccgagctgtggaaggtggagggcaagaagccgtccgtgggc
tcgggcgagcaggcccaggtgctctacgaccgcgtcaaggacacgcccttcgtggtctcg
gccatcgaggagaaggagcgccagcgccacccttcgccgccgttcatcacctcgactttg
cagcaggacgccagccgccgcctgggctacacggccaagcgcaccatgtccacggcccag
cggttgtacgagggcgtggagcttggcgagagcggcgtgaccgcgctcatcacctacatg
cgcaccgactccgtgcgcgtggcagacgaggcgcgcgacgcggcccaggctttcatcgtg
gagacgctgggcgcggactactacccgcccaagccccgatatttcaagaccaagtccggc
gcgcaggacgcccacgaggccatccgccccgtcgatgtgcgcgtcacgcccgagtccgtg
cgcaagcacctgcctgcggaccagtacaagctctacacgctcatctggcagcgcttcatg
gcctcgcagatggccgcagcccgcctgcacgacacgacagtgaccgtggacagcggcccg
gcccagtggcgggccaagggcgagcgcgtgctcttccccggcttcctcaaggtctacggc
gtggacgaagccacggacgaaaagaccgagggcgaaggcggcgagtcgacgtccaccaag
gccgccatgctgcccaagctggaaaagggcatgcagctcacggtgcgcaaactgaccaag
gatcagaagttcacacagccgccgccgcgctacaccgaagcctcgctggtcaaggaactg
gaagagcagggcatcgggcgtccttcgacctatgcggccatcatctccaccctgctggac
cgcgactacgcccggctggaagagaagaaattcgtgccctccgagcttggcgtgacggtc
gttgacctgctgaccaagcatttccagagcctcatggacgtgcacttcaccgcgggcatg
gaagagcagctggacgacgtggccggcggcaaggtcaactgggtcgagctgctcaagcat
ttcaccggcgacttctaccctaccctggacaaggccaaggacgagatggtccaggtcaag
ggcgggctggagaccggcatcgtctgcgatctgtgcggcaagcccatgaacatccgcttc
ggcaagaacggcgagttcctgggctgctccggctaccccgactgcaagggcatcaagaac
ttcacccgcgacgagcagggccagatccagatcgtcgagcgggccaacgagatgcccgag
aaggtcggcacctgcccggactgcggcaaggatctcgtgctcaagcgctcgcgcaccggc
agccgcttcatcgcctgctccgggtaccccgagtgcaagcacgctgagcctcattccacc
ggcgtgacctgcccgcgcgagggctgcaccggccagctcgtggagaaaagctccaagcgc
ggcaaggtcttctactcctgctcgacctaccccaaatgcaactacgcaacctgggactgg
cccattgccaagccctgcccgcaatgcgactccaagatcctgaccatcaagaccaccaag
gcgcgcggcgagcacgtggcctgcccggaaaaggcctgccgcttcacccgcgagttggag
cccgacgagtcggttggttaa
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integrated database retrieval system
