Desulfocurvibacter africanus subsp. africanus: Desaf_1418
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Entry
Desaf_1418 CDS
T01662
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
daf
Desulfocurvibacter africanus subsp. africanus
Pathway
daf03420
Nucleotide excision repair
daf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
daf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Desaf_1418
03430 Mismatch repair
Desaf_1418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daf03400
]
Desaf_1418
Enzymes [BR:
daf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Desaf_1418
DNA repair and recombination proteins [BR:
daf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Desaf_1418
MMR (mismatch excision repair)
Other MMR factors
Desaf_1418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DEAD
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
EGJ49756
UniProt:
F3YZQ7
LinkDB
All DBs
Position
1586339..1588534
Genome browser
AA seq
731 aa
AA seq
DB search
MPIDFTRELNPAQCEAVQALEGPVLVIAGAGSGKTRTIVYRLAHLVEQGVQPESILLLTF
TRKAAQEMLARASLLLDHGLTGVSGGTFHSFAYAQLRRHAQLFDLKSGFTVMDRADALDV
LGQAKDSLGLGRTERSFPKKETILELIGKSRNKETDLESVLQQESFHLMPYLEILGNMAK
GYQAIKQRHGLLDYDDLLFVFERLLTEREDVRERLRERFRYIMVDEYQDTNKVQARLVKL
MAGLQGNVMAVGDDAQSIYAFRGASVANILRFPKEYPGALVIRLEQNYRSTQPILDLANE
VLRHAAHKFDKHLFTEREDGPKPMLVRTLSDATQHQIAMSLIADLQKKYALHEIAVLFRA
GYQSYGLEVQLSKLGIRFQKYGGIRFSEAAHIKDALAYLRLVVNPSDLPAWQRVFKHVKG
VGPKTAQGLFEAVISGNEAHVAKTRKRFPELTELFGLLDGLRARRPAPLTALDEVMAWYG
PILIRDYPDDYPRRQQGLEQLARIAANYPDLEAFLGDLTLENPEDNSREAAHDALVLSTI
HSAKGLEWKAVLMLDLVEDRFPSRKAMQRPEDLDEERRLMYVACTRAKDFLALFVPETVY
MRGLERSEPTRPSPFVLEMEPSSYEEWRENFSGGLARAGGGAPMGRRQALDQAIGRPSGS
VRSAAPEFAAGGDAQANSNGIRNTKLGFCTHRVYGRGKIIAEAAPGKYRINFPGFGIKTI
LAEYLTLEDAS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcgacttcacgcgggaattgaatccggcccagtgcgaggccgtgcaggctctt
gaggggccggtgctggtcatcgccggcgccggcagcggcaagacgcgcaccatcgtctat
cgtctggcccacttggtggagcagggcgtgcagcccgaatccatcctgctgctgaccttc
acgcgcaaggccgcccaggaaatgctggcgcgggcctcgctgctgcttgaccatgggctg
accggggtcagcggcggcacgttccattccttcgcctacgcccagctcaggcggcatgcg
cagcttttcgatctgaagagcggcttcacggtcatggaccgcgccgacgcactggatgtc
ctcggccaggccaaggactccctgggcctcgggcgcaccgagcgctccttcccaaagaag
gagaccatcctggagctgatcggcaagtcgcgcaacaaggagacggacctggagagcgtg
ctgcagcaggagtccttccacctgatgccctacctggaaatcctgggcaacatggccaag
ggctaccaggccatcaagcagcgccacgggctcctggattatgatgatttgctgttcgtc
ttcgagcggctgctgacggagcgggaggatgtgcgcgagcggctgcgcgagcgtttccgc
tacatcatggtggacgagtaccaggacacgaacaaggtccaggcccggctggtcaagctc
atggccggcctgcagggcaacgtcatggccgtgggcgacgacgcccagtcgatctacgcc
ttccgcggcgccagcgtggccaacatcctgcgcttccccaaggagtacccgggagctttg
gtcatacggctggagcagaactaccgctccacgcagcccatcctggacctggccaacgag
gtgctgcgccacgcggcccacaagttcgacaagcatctgttcaccgaacgcgaggacggc
cccaagccgatgctcgtgcgcaccctgagcgacgccacccagcaccagatcgccatgtcg
ctcatcgccgatttgcagaagaagtacgccctgcacgagatagcagtgctcttccgcgcc
ggctaccagtcctatgggctggaggtgcagctcagcaagctgggcatccgcttccagaag
tatgggggcatccgtttttccgaggccgcgcatatcaaggacgccctggcctacctgcgc
ctggtggtcaatccttcggatctgcctgcgtggcagcgcgtattcaagcatgtcaaaggc
gtggggcccaagaccgcccaaggcctgttcgaggcggtcatctccggcaacgaggcccac
gtggccaagacgcgcaaacgcttccccgagttgaccgagctgttcgggctgctggacggc
ctgcgcgccagacggcccgctcccctgacagcgcttgacgaggtcatggcctggtacggg
cctattctcatccgcgactacccggatgattatcccaggcggcagcaaggcctggaacag
ctggcgcgcatcgcagccaactaccctgacttggaggccttcctgggcgacctgaccctg
gagaatcccgaggacaacagccgcgaagcggctcacgacgcgttggtgctgtccaccatc
cactcggccaagggtctggagtggaaggccgtgctcatgctggatctggtggaggatcgc
ttcccttcgcgcaaggccatgcagcggcccgaggatttggacgaggagcgtcggctcatg
tacgtggcctgcacgcgggccaaggatttccttgccttgttcgtgcccgagacggtctac
atgcgcggtcttgagcgtagcgagccgacccggcccagccccttcgtgctggagatggag
ccgtccagctatgaggagtggcgcgagaatttttcgggcggcttggcccgcgccgggggc
ggagcgcccatgggccgcaggcaggccctggaccaggccatcgggcggccgtccggttcc
gtccgctcagctgcgccggaattcgccgctggcggcgatgcgcaggcgaacagcaacggc
atccgcaacaccaagctcggcttctgcacgcaccgtgtctacggccggggcaagatcatc
gccgaggccgcgcccgggaaataccgcatcaattttcccggcttcggcatcaagaccatc
cttgccgaatacctgaccctcgaagacgcctcctga
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