Desulfocurvibacter africanus subsp. africanus: Desaf_2220
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Entry
Desaf_2220 CDS
T01662
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
daf
Desulfocurvibacter africanus subsp. africanus
Pathway
daf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
daf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Desaf_2220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
daf03021
]
Desaf_2220
03400 DNA repair and recombination proteins [BR:
daf03400
]
Desaf_2220
Enzymes [BR:
daf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Desaf_2220
Transcription machinery [BR:
daf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Desaf_2220
DNA repair and recombination proteins [BR:
daf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Desaf_2220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
HHH_XRCC3_RpoA
EF-hand_EFHB_C
Motif
Other DBs
NCBI-ProteinID:
EGJ50548
UniProt:
F3YWQ5
LinkDB
All DBs
Position
2460790..2461833
Genome browser
AA seq
347 aa
AA seq
DB search
MLIHNGDRLINTRNWSELVKPEQIGRAAKSTNTYAKFVCEPLERGFGTTIGNALRRVLLS
SLQGAAIISVRIQGVQHEFTTIPGVQEDVTDLILNLKLVRFSMTTDQPQHIVLRADKKGA
VTAAAIQENQNLRVLNPGQHIATLSEEMEFKIDLEVRMGKGYVPAEMHDGLQNEIGLIPL
DASFSPVKKVAYTVEQARVGQMTNYDKLLMEVWTDGSVTPEDAVAYSAKILKDQLSVFIN
FDEHSSDEEKSYQPSSGEENPNLYKNIDELELSVRATNCLKSANIRLVGELVQKTENEML
KTKNFGRKSLEEIRRVLENMGLEFGMHVDSFDEKYQEWLKRKDSDEA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctcatccataatggcgacagactcatcaacacccgcaactggtccgagctggttaag
ccggaacagatcggcagggccgccaagtcgacgaacacgtatgctaagttcgtctgcgag
cccctggagcgcggtttcggcacgacaataggcaatgccctgcgtcgtgtgcttctgtcc
tccttgcagggagcggcaatcatctccgtgcgcatccagggcgttcagcacgagttcacc
actattccaggggttcaggaagatgtcaccgaccttatcctgaatctcaagctggtcagg
ttttccatgaccactgaccagcctcagcacatagtgctccgtgccgacaagaaaggggcg
gtcaccgcggcggcgatccaggagaaccaaaacctccgagtgctcaacccgggccagcat
atcgccactttgagcgaggagatggagttcaagatcgacctggaagtgcgcatgggcaag
ggctatgtgccagctgaaatgcacgacggcctgcagaacgagattgggctcatccctctg
gacgcgagcttctctccagtcaagaaggtcgcctacacagtggagcaggcccgcgttggg
cagatgaccaactacgataagctcctcatggaagtttggacggacggatcggtgactccc
gaggatgcagtggcttacagcgccaagatcctcaaggatcagctctcggtgttcatcaac
ttcgacgagcactcctcggacgaggaaaagtcctatcagccctccagcggcgaagagaac
ccgaacctctataagaacatcgacgagctggaactctcggtcagggctaccaattgccta
aagagcgccaatatccgtctcgtgggcgagctcgtccagaagacggaaaatgagatgctc
aagaccaagaattttggccgcaagtcccttgaggagattcgtcgggtgctcgagaacatg
ggactcgagttcggcatgcacgtcgacagtttcgacgaaaaataccaagagtggctgaag
aggaaagacagcgatgaggcataa
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