Desulfocurvibacter africanus subsp. africanus: Desaf_2394
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Entry
Desaf_2394 CDS
T01662
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
daf
Desulfocurvibacter africanus subsp. africanus
Pathway
daf03030
DNA replication
daf03430
Mismatch repair
daf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
daf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Desaf_2394
03430 Mismatch repair
Desaf_2394
03440 Homologous recombination
Desaf_2394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
daf03032
]
Desaf_2394
03400 DNA repair and recombination proteins [BR:
daf03400
]
Desaf_2394
Enzymes [BR:
daf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Desaf_2394
DNA replication proteins [BR:
daf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Desaf_2394
DNA repair and recombination proteins [BR:
daf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Desaf_2394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
ResT-TelK_cat
DUF5487
Motif
Other DBs
NCBI-ProteinID:
EGJ50718
UniProt:
F3YYG4
LinkDB
All DBs
Position
2660034..2663498
Genome browser
AA seq
1154 aa
AA seq
DB search
MPDFVHLHCHTEFSLLDGAIRIKDLCAKTKEFGSPAVAITDHGNMHGAVDFYMKAKDCGI
KPILGCEVYVAGEGGVEEKGPGAKRHHLVLLAKDLTGYHNLLKLVSKASLHGFHYKPRVD
KTWLMEHAEGLIALSACLAGEIPRVLMGQGLDAGIRTANEYAQIFPGRFYLEMQANGLEE
QFRANELIRKCADATGLPLVATNDCHYLTREDVEAHDVLLCIQTAAMVADKDRMRFGTSE
LYYRPPQEMAREFSDCPEALENTLKIADMCSVDLNLKQLHFPKYDLPAGMTLEDEFRKLS
RDGLKERLEKLPYTVDEQAYWKRFEYELDVICKMQFPGYFLIVQDFINWAKRNAIPVGPG
RGSAAGSIVAWALKITNLDPIPYNLLFERFLNVERISMPDIDVDFCERRRHEVIDYVTRH
YGEDNVAQITTFGTMKAKAAVKDVGRALGMSFAETNRIAKLIPEDLKMTIGKALDSEQEL
RNLYDLDPQVRKCLDVSIRLEGLCRHCSTHAAGVVISPGPMSDYLPLYRDKKGGVVTQYD
MKKVEKVGLVKFDFLGLRTMTVIHDTLDNIRLQGLTPPDLDVLPLDDLETYKLYSRGDTD
GIFQVESSGMRKYLQMLKPSCFEDIIAMLALYRPGPLGSGMVDEFIKRKHGEVAVTFPHE
SLSEVLKPTYGVIVYQEQVMSVAQIMAGYTLGQADLLRRAMGKKNPEEMAKQRERFLSGA
REKKIADATANEVFDLMEKFAEYGFNKSHSAAYALISYHTAYLKVHHKHEFMAAIMTSEI
ENQDKILKYINSCRDMEIKVLPPDVNASLRQFTVEQGRIRYGLGGVKNVGDEAIKDIVAA
READGPFRSLLDLCCRANLRKVTKRVLESLIKAGAVDGFGATRAALIAGLDRAVGLAQKK
QKERESGQISMLGLMGTNEREAALPGLGVACPEQSLDEWPDDEKLRNEKEALSFYLSSHP
LLAFRHELRRLRCSSLEDCAEMGEGMQVKVALLITGVKEHITKRGDKMAFCQAEDLTGAT
ELVMFPEVYQKAKPHMEGDQPLLVTAKISEIEGGDGDDGEASSKRAKLLAEDICLLSGVV
SVGEDPVELYLPRTAFDSGRMDTLKAILARYPGRAPVQFELTLPEGCCRLRLGPRYTVAP
TVDFWKEIEGWRTA
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacttcgtccatctgcactgccatactgaattcagcctgctggacggcgcgatc
cgcatcaaggatctgtgcgccaagaccaaggaattcggctcgccggccgtggccatcacc
gaccacggcaacatgcacggtgcggtggacttctacatgaaggccaaggattgcggcatc
aagcccatcctgggctgcgaagtttatgtggctggcgagggcggggtggaggagaagggc
cccggcgccaagcgtcatcacttggtgctgctggccaaggacctcacgggctaccacaat
ttgctcaagctggtttccaaggccagtctgcacggtttccattacaagccgcgcgtggac
aagacttggctcatggagcacgccgaggggctcatcgccctgtcggcctgcctggcgggc
gagatcccgcgcgtgctcatgggccaggggctggacgcgggcatccgcacggccaatgaa
tacgcgcagatatttccaggccgcttctacctggaaatgcaggccaatggcctggaagag
cagttccgggccaacgagttgattcgcaagtgcgccgatgccacgggattgccgctggtg
gccaccaacgactgccactatctgacgcgcgaggacgtcgaggcgcatgacgtcctcctg
tgcatccagaccgcggccatggtcgcggataaggaccgcatgcgcttcggcaccagcgaa
ctgtactaccgtccgccgcaggagatggcgcgcgagttctcggactgcccggaggccctt
gagaacacgctcaagatcgcggatatgtgcagcgtggatttgaacctcaagcagcttcac
ttccccaaatatgatctgcccgcgggcatgaccctggaggacgagttccgcaagttgtcc
cgcgatggcctcaaggagcgcttggagaagctgccttacacggttgacgagcaggcctac
tggaagcgctttgagtacgagctggacgtcatctgcaagatgcagttcccaggctacttt
ctcatcgtgcaggatttcatcaactgggccaagcgcaacgccatccccgtgggaccaggc
cgcggctcggccgccggctccatcgtggcctgggcgctcaagatcaccaacctcgacccc
atcccctacaacctgctgttcgagcgcttcctgaacgtggagcgcatatccatgccggat
atcgacgtggacttctgcgagcgcagacgccacgaggtcatcgactacgtgacccgccac
tatggcgaggacaacgtggcccagatcacgaccttcggcaccatgaaggccaaggccgcg
gtcaaggacgtgggccgggctctgggcatgagcttcgcggagaccaaccgcatcgccaag
ctcatccccgaagatctcaagatgaccatcggcaaggccttggacagcgagcaggagctg
cgcaacctgtacgatctcgatccgcaggtgcgcaaatgcctggacgtgtccattcgcctg
gaagggctgtgtcggcactgctccacgcacgccgcgggcgttgtcatcagtcccggcccc
atgtcggactacctgccgctgtaccgagacaagaagggcggcgtggtcacgcagtacgac
atgaaaaaggtcgagaaggtcgggctggtcaagttcgacttcctgggcctgcgcaccatg
accgtcatccacgataccctggacaacattcgtctccagggtctgaccccgccggacctg
gacgtcctgcccctggacgacctggagacgtacaagctctattcgcgcggcgacaccgac
ggcatcttccaggtcgaatcctcgggcatgcgcaagtacttgcagatgctcaagccgtcc
tgcttcgaggacatcatcgccatgctcgccctgtaccgtcccggtccgctgggttcgggc
atggtcgacgaattcatcaagcgcaagcacggcgaagtggccgtgaccttcccgcacgag
agcttgagcgaggtgctgaagcccacctacggcgtcatcgtctatcaggaacaggtcatg
tccgtggcccagatcatggcgggctatactcttggccaggcggacctgctgcgccgggcc
atgggcaagaagaaccctgaggagatggccaagcagcgcgagcgcttcctgtctggcgcg
cgcgagaaaaagatcgccgacgccacggccaacgaggtctttgacctcatggagaagttc
gccgagtacggcttcaacaagtcgcacagcgcggcctatgcgctcatctcctatcacacg
gcctatctcaaggtgcaccacaagcacgagttcatggccgccatcatgacctcggaaatc
gagaaccaggacaagatcctcaagtacatcaactcctgccgggatatggaaatcaaggtc
ctgccgccggatgtgaacgccagcctgcgtcagttcacggtggagcaaggccgcatccgc
tacggtctgggcggggtcaagaacgtgggcgacgaggccatcaaggacatcgtggccgca
cgcgaggccgatggcccgttccgaagcctgctggacctgtgctgccgggccaatctgcgc
aaggtcaccaagcgcgtgctggaaagcctcatcaaggccggggcggtggacggcttcggg
gccacgcgcgcggcgcttatcgccggcctggaccgcgccgtcggcctggcccagaagaag
cagaaggagcgcgagtccggccagatctccatgctcgggctcatgggcaccaacgaacgc
gaggctgccttgcccggcctgggcgtggcctgcccggagcagtccctggatgagtggcca
gacgacgagaagctgcgcaacgaaaaggaagccctgagcttctacttgtccagccatccg
ctgctggccttccgccacgagctgcgccgcctgcgctgttcgagcctggaggactgcgcc
gagatgggcgagggcatgcaggtcaaggtcgcgctgctcatcacgggcgtcaaggagcat
atcaccaagcgcggcgacaaaatggccttctgccaagccgaggacctgaccggcgcaact
gagctggtcatgttccccgaggtctaccagaaggccaagccgcatatggaaggggaccag
ccgctactcgtaacggccaagatcagcgaaatcgaaggcggtgacggtgacgacggagaa
gcttcgtctaagcgggccaagctgctggccgaagatatctgtctgctgtctggcgtggtc
tcggttggcgaggatccggtggagctgtacctgcccaggacggctttcgattccggtcgc
atggacacgctcaaggccattctggctcgttatccgggccgagcgccggtacagtttgaa
ttgaccttgcccgagggctgctgccgccttcgcttggggccgcgctacaccgtggcgccc
acggtggatttctggaaggagatcgaggggtggcgcacggcttga
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