Desulfocurvibacter africanus subsp. africanus: Desaf_2786
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Entry
Desaf_2786 CDS
T01662
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
daf
Desulfocurvibacter africanus subsp. africanus
Pathway
daf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
daf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Desaf_2786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daf03400
]
Desaf_2786
Enzymes [BR:
daf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Desaf_2786
DNA repair and recombination proteins [BR:
daf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Desaf_2786
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
PIF1
HHH_2
HHH
SLFN-g3_helicase
AAA_22
NTPase_1
nSTAND3
NPHP3_N
UvrD-helicase
AAA
AAA_16
NAT10_TcmA_helicase
AAA_28
AAA_14
Thymidylate_kin
AAA_18
HTH_IclR
Zeta_toxin
CbiA
TsaE
P-loop_TraG
MeaB
5_3_exonuc
T2SSE
AAA_7
Motif
Other DBs
NCBI-ProteinID:
EGJ51099
UniProt:
F3Z196
LinkDB
All DBs
Position
3084005..3086260
Genome browser
AA seq
751 aa
AA seq
DB search
MSEQQQMALPGDEAGSETLQVALRAEVRQVVYSNAENGYCVLRAASASEPGLVTAVGILG
QVTPGEMLELSGRWIVHSKFGRQFEVTSFRQTYPATEHGIVRYLSSGLIKGVGPKTAEAL
VATFGTAVLDIIESEPERLLEVDGIGKKTLERIRESWGTQRDIRTLMLFLQSHDVPTTYA
ARIYKAFGAEAVERLKENPYELAYLVRGIGFRTADVMAMKLGLPPDSQVRLEAAIVYALF
SMSEKGHLFFPEDKLLDQVDRMLEGMETAKLRQALAGLLERKRVVVEEIGTADVQRGVYL
QHFYRWEQETASRLYNLVSHPAPTATLEKVERGLPELEAETGIKLSHEQREAVLGAVANK
AFIITGGPGTGKTTITRMVVRSLKKAGLKIKLAAPTGRAAKRLSEASGESASTLHRLLQY
SPEQGFSINEDSKLKAEAVIIDEASMLDAQLFVSVLRALPLTCRLILVGDVNQLPSVGPG
NILSDLLASQVVPSMCLTRIYRQAQESWIVTNAHRVNDGQFPGEDSKAVPPKKDFFWVRQ
DEPARVQALILQLVCERIPEIYGLDPKRDIQVLTPMHKGEVGTQALNTMLQERLNPLRPG
MQEIVRGRTTFRPGDRVLQLRNNYEKEIYNGDLGWVTSVDPEAGEALVDFEGRGVAFEAA
DLDELTLAYAVSVHKSQGSEYPAVVVPMVTQHYIMLQRNLLYTALTRARELAVLIGSDKA
VGIALRANDAEKRYTHLKVRLQELFNQTQLF
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacagcagcagatggcccttcctggcgacgaagccggttccgaaacgctccag
gtagcgctcagggccgaggtgcgccaggtggtctactcgaacgccgagaacggctactgc
gtgttgcgcgccgcctcggccagcgagcccggcctggtcacggccgtgggcatcctgggc
caggtcacgcctggcgagatgctggagctgtccggccgctggatcgtgcactccaagttt
ggccgccagttcgaggtgacctccttccgccagacctatccggccacggaacacggcatc
gtgcgctatctttcgtccgggctcatcaagggcgtggggccgaagacggccgaggctctg
gtggcgaccttcggcacggccgtactggacatcattgagagcgagcccgagcggctgctc
gaagtggatggcatcggcaagaagaccctggagcgcatccgggaatcctggggcacccag
cgggacattcgcacgctcatgctctttctgcagtcccacgacgtgcccaccacctacgcg
gccaggatctacaaggcctttggggccgaggccgtggagcggctcaaggagaacccctac
gagttggcctatctggtgcgcggcatcggcttccgcacggccgacgtcatggccatgaag
ttgggcctgccgccggacagccaggtgcgcctggaggccgcgatcgtctacgccttgttc
agcatgtccgagaagggccacttgtttttccccgaggacaagctcctggaccaggtggac
cgcatgctggagggcatggagacggccaagttgcgccaagccctggccggcttgctggag
cgcaagcgcgtggtggtcgaggagattggcacggccgacgtgcaacgcggcgtgtatttg
cagcatttctaccgctgggagcaggagactgcctcgcggctgtacaatctcgtgagccat
cccgcacccacggcaaccctggagaaggtcgagcgcggcctgccggaactggaagccgag
accggcatcaagctctcccacgagcagcgcgaggccgtccttggcgcagtggcaaacaag
gctttcatcatcaccggcgggccgggcacgggcaagacgaccataacgcgcatggtcgtg
cgctcgctcaaaaaggccgggctcaagatcaagctcgccgcgcccacgggccgcgcggcc
aaacgactgtccgaggcttccggcgagtccgcctcgaccctgcaccggctgctgcagtac
tcgccggaacagggcttctcgatcaatgaggactccaagctcaaggccgaggcggtcatc
atcgacgaggccagcatgctcgacgcgcagcttttcgtcagcgtgttgcgtgcgcttccg
ctgacctgccggctcattctggttggcgacgtgaaccagcttccgagcgtggggccgggt
aacattctgtccgacctgctcgccagccaggtcgtgccgagcatgtgccttacgcgcatc
taccgccaggctcaggagagctggatcgtgaccaacgcccaccgggtcaacgacggtcag
ttccccggcgaagacagcaaggccgtgccgcccaagaaggacttcttctgggtgcgccag
gacgaaccggcccgcgtgcaggcgctcatcctgcagctcgtgtgcgaacgcatccccgaa
atttacggcctggatcccaagcgggacatccaggtgctcacgcccatgcacaagggcgag
gtgggcacgcaggcgctcaacaccatgctccaggaacggctcaatccgctcaggcccggc
atgcaggagatcgtgcgcggccgcacgaccttccgtcccggcgaccgggtgctgcaactg
cgcaacaattacgagaaggaaatctataacggcgacctgggctgggtcaccagcgtggac
ccggaggcgggcgaggcgctggtggatttcgagggcaggggagtggccttcgaggccgcg
gatctggacgagctgaccctggcctacgccgtgagcgtgcacaagtcccagggcagcgag
taccctgccgttgtggtgcccatggtcacgcagcattacatcatgctgcagcgcaacctg
ctctacaccgcgctgacccgcgcccgggagctggccgtgctcatcggcagcgacaaggcc
gtgggcatcgccctgcgcgccaacgatgcggagaagcgctatacgcacctgaaggtgaga
cttcaggaactgttcaaccagacgcaacttttttag
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integrated database retrieval system
