Desulfocurvibacter africanus subsp. africanus: Desaf_2903
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Entry
Desaf_2903 CDS
T01662
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
daf
Desulfocurvibacter africanus subsp. africanus
Pathway
daf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
daf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Desaf_2903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daf03400
]
Desaf_2903
DNA repair and recombination proteins [BR:
daf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Desaf_2903
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Desaf_2903
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
DUF7623
AAA_22
Kinesin
AAA_5
UB2H
SWI2_SNF2
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
EGJ51212
UniProt:
F3Z1S7
LinkDB
All DBs
Position
3201772..3203811
Genome browser
AA seq
679 aa
AA seq
DB search
MPIPELTHNWQTMSEKFKLVSPFEPMGDQPQAIEKLAWAIENGVSEQVLLGVTGSGKTFT
MANVVAKVNRPTLVMAPNKTLAAQLFNEFKALFPENAVEYFVSYYDYYQPEAYLPHTDTY
IEKDSSINDDIDKLRHSATHALLTRRDVLIVASVSCIYGLGSPEYYAKMVVPLERGQQLS
MERLAARLVEVHYERNDYDFSRGKFRVRGDVLEIIPAYSRERALRVEFFGDEVEAIYETD
PLTGEVFSTIKKTVIFPASHFVSDRDNTSRASSDIRDELGERLRYFQRENKLLEAQRIEQ
RTMFDLEMIEELGYCNGIENYSRHLDGRRAGEPPATLLDYFPEDFLLFVDESHITISQIG
GMFKGDRSRKQTLVDFGFRLPSALDNRPLAFEEFLTRVNQCVYVSATPGPWELERSGDAV
VEQIIRPTGLVDPILEVRPVKGQMDNLLAECKLRKTRGERVLVTTLTKRMAEDLTEYMLS
MGVQTRYLHSDIDTLERVAIIQALRAGEFDVLVGINLLREGLDIPEVSLVAILDADKEGF
LRSARSLVQTFGRAARNVGGKVVMYADKITDSMRAAMDETNRRRTRQEDHNREMGITPRT
ILKSLENVLEKLYPDSEAETYAKVAEEAAKYGHDPKRIEKEIKSLERDMREAAKELAFER
AAEIRDRIFSLKQLLLESA
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcccatacctgagttgactcataactggcaaactatgtctgaaaaatttaagcttgtc
agccccttcgagcccatgggcgatcagcctcaagctatcgagaagcttgcctgggccatc
gaaaatggcgtgagcgaacaagtgctgttgggtgtcaccggttcgggcaaaactttcacc
atggccaacgtcgtagccaaggtgaaccggcccacgctggtcatggcgccaaacaaaacc
ctggccgcccagctcttcaacgaattcaaggcgctctttcccgaaaacgcggtggagtat
ttcgtaagctattacgactattaccagcccgaagcttacttgccgcacacggacacgtat
atcgagaaagactcttccatcaacgacgatatcgacaagctgcgccactcggccacgcac
gcgctgctgacccggcgcgacgtactcatcgtggcctccgtgtcgtgcatctacggcctg
ggctctcccgagtattacgccaaaatggtcgtgcccctggagcgtggacagcaattgtcc
atggagcggttggccgcgcgcttggtggaagtgcattacgagcgcaacgactatgacttc
agccgaggcaagttccgcgtgcgcggcgatgtgctggagatcattccggcctactcccgc
gagcgcgcgttgcgggtggagttcttcggggacgaggtggaagccatctacgagaccgac
ccgctgacgggggaggttttctccaccatcaagaagacggtcatctttccggccagccac
ttcgtttcggatcgcgacaacacctcgcgtgcatcgagcgatatccgcgacgagcttggc
gagcggctgcgctatttccagcgcgagaataagctgctggaggctcagcgtatcgagcag
cgcaccatgttcgacttggagatgatcgaggaactgggctactgcaacggcatcgaaaac
tactcgcgccatctggatggccgcagagcgggtgagcctccggccacgttgctggactat
ttcccagaggacttcctgcttttcgtggacgagtcgcacatcaccatctcccagatcggc
ggcatgttcaaaggcgaccgctcgcgcaagcagacactggtggacttcggcttccgctta
ccttcggccttggacaaccggcccctggccttcgaggagttcctgacgcgcgtcaaccag
tgcgtgtacgtctcggccacgcctggcccctgggaactggagcgctcgggcgatgcggtg
gttgaacagatcatccgccccacgggcctggtggatcccattctcgaggtgcggccggtc
aagggccagatggacaacctgctggccgagtgcaagctgcgcaagacgcgtggcgagcgg
gtgctggtcaccactttgaccaagcgcatggccgaggacctgacggaatacatgctgtcc
atgggcgtgcagacccgctacctgcattcggacatcgacaccctggagcgcgtggccatt
atccaggccttgcgcgccggtgaattcgatgtgctggtgggcatcaacctcctgcgcgag
ggtctggacatccccgaggtttcgctggtggccatcctggatgcggacaaggaaggcttc
ctgcgctccgcgcgctcccttgtgcagacctttggccgcgccgcacgcaatgtcggcggc
aaagtcgtcatgtatgcggacaaaattaccgactccatgcgcgcggccatggatgaaacc
aatcgtcgtcggaccagacaggaggaccataaccgcgagatgggcatcaccccgcggacc
atattgaaaagtctggagaacgtactcgaaaagctgtatccggacagcgaggccgaaacg
tacgccaaggtcgccgaagaggcggccaagtacgggcacgatcccaagagaatcgagaag
gagatcaagtcgctggagcgggacatgcgcgaggccgccaaggagttggccttcgagcgt
gccgccgaaatacgcgaccgcatcttctcgctcaagcaactgctactggagagcgcatga
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