Desulfocurvibacter africanus subsp. africanus: Desaf_2940
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Entry
Desaf_2940 CDS
T01662
Name
(GenBank) HhH-GPD family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
daf
Desulfocurvibacter africanus subsp. africanus
Pathway
daf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
daf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Desaf_2940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daf03400
]
Desaf_2940
Enzymes [BR:
daf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Desaf_2940
DNA repair and recombination proteins [BR:
daf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Desaf_2940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
AlkA_N
DUF2017
Motif
Other DBs
NCBI-ProteinID:
EGJ51248
UniProt:
F3Z239
LinkDB
All DBs
Position
complement(3244956..3245924)
Genome browser
AA seq
322 aa
AA seq
DB search
MTPPALLQNTMLSCVVELPHDFRADDVLAFHGRDSAQIAEYTDAQTFMKGLMWSGLAACL
TIRFHARHADVELKIDKSPIDSAPLDRMEPNASSDANETAELRRMAVRMLGLTQQIDDFE
RTYRAHPQLGPLIAGHPGLRVPLTASPFEALAWAITGQQISLGVAISLRRKMILAAGVRH
SSGLACHPDAQRLSRLTEADLRQAGFSQAKAQTLMILCHLISEHRLPLDAWVDALPVDTI
REQLLAIRGIGPWTVEYTLLRGFGWLDGSLHGDAAVRRSLQALLGCTEKLTSEQTKQWLA
PFSPWRALVAAHLWAALGVKGA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaccccccctgccctactccaaaacaccatgctgtcctgcgtggtggagttgccccac
gatttcagggcggacgacgtcctcgctttccatggccgcgactctgcgcagattgccgag
tacaccgatgcacaaacgtttatgaagggtctgatgtggagtgggcttgccgcctgcctc
acgatcaggttccacgcccggcacgccgatgtcgaactgaaaatcgacaagtcgccaatc
gacagcgcgcccctggacagaatggagcctaacgcttcgtctgatgccaacgaaacggcg
gagcttcgacgcatggcggtgcgaatgctgggactgacgcagcagatcgacgacttcgag
cgcacgtatcgggcgcatccgcagctgggaccgcttatcgctgggcatcctgggctgcga
gtgccgcttaccgcctccccattcgaagctctggcctgggccattaccggacaacaaatc
agcctgggcgtggccatatccctgcgtcgcaagatgatccttgccgcaggtgtgcggcat
tcgagcggcctcgcctgccatccggatgcccaacgactttcgcgcctaaccgaagcggat
ttgcggcaggctgggttttctcaggcaaaggcgcagactctgatgatcctttgccacttg
attagtgagcaccgcttgcctttggacgcgtgggtggatgcactgcccgtcgatactatc
cgcgaacagcttctggccatacgcgggatcgggccgtggaccgtggaatacaccctgctg
cgcggcttcggctggctggatgggtcattgcatggagatgccgctgtccgccgcagcctg
caagcgctgctcggctgcacggaaaaactcaccagcgagcaaacaaagcaatggcttgct
cccttttcgccgtggcgcgcgctggttgccgcgcacctctgggccgcccttggcgtcaag
ggagcctag
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