Desulfocurvibacter africanus subsp. africanus: Desaf_3042
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Entry
Desaf_3042 CDS
T01662
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
daf
Desulfocurvibacter africanus subsp. africanus
Pathway
daf00300
Lysine biosynthesis
daf00470
D-Amino acid metabolism
daf01100
Metabolic pathways
daf01110
Biosynthesis of secondary metabolites
daf01120
Microbial metabolism in diverse environments
daf01230
Biosynthesis of amino acids
Module
daf_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
daf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Desaf_3042
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Desaf_3042
Enzymes [BR:
daf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Desaf_3042
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Histone_HNS
Motif
Other DBs
NCBI-ProteinID:
EGJ51341
UniProt:
F3Z2K8
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All DBs
Position
3348954..3350216
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AA seq
420 aa
AA seq
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MHHFEYHNGRLHAEDIPVEDLARQFGTPLYVYSKATFSRHFQAFDSAFSALPHITCYSVK
ANSNLCVLRLLASLGAGMDIVSGGELHRALKAGVSPEKIVYSGVGKRPEEIRQALDAGIL
MFNVESREELRTISAIASESGRIARISLRINPDVDPKTHPYISTGMKKNKFGLDMETSLE
TYRMAKGLPGIEPVGIDCHIGSQLTSIEPFLEALDKLVEFYGKLREMGIDIRYLDLGGGL
GITYNEEEPPHPEAFGKALTERLKGLPLTIILEPGRVIAGNAGILVTKVLYTKSTPSKDF
VIVDAAMNDLVRPSLYGSFHRIAEVVEHNRPKINVDVVGPICESGDFLARDRELPNVESG
ELLAAFSAGAYGFAMSSQYNSRPRAAEVMVDGEVTVLARRRETYDDLVAAEMGCLERVVD
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatttcgaataccacaacggccgcttgcatgccgaggacattccagtggaagat
ctggcccgacagttcggcacgcctctttacgtctacagtaaagctacatttagccgacat
tttcaggcctttgactccgccttctccgctttgccacatatcacctgctactcggtcaag
gccaactccaatctttgcgtgctgcgactcctggccagtctgggcgccggcatggacatc
gtctcgggcggcgagctgcatcgcgcgctcaaggccggcgtttctcctgagaagattgtt
tactccggtgtgggtaagcgccctgaggagatccgccaagccctggatgcgggcattctc
atgttcaatgtggaatcacgtgaagaactcaggaccataagcgctatagccagcgaaagc
ggacggatcgcgcgcatttccctacgcatcaatcctgacgtggatcctaagacgcatcct
tacatctccacgggcatgaagaaaaacaagttcggcctggatatggagacttccttggaa
acttacaggatggccaagggcttgcctggcatcgagcctgtgggcatcgactgccatatt
ggttcccagttgaccagcatcgagccgttcctggaggccttggacaagctcgtggaattt
tacggcaaactgagggaaatgggcattgatatccgctacctcgatctgggcggcggtttg
ggcatcacctacaatgaggaagagcccccacaccccgaagcctttggcaaagctcttacg
gaacggctcaagggtcttccgctcaccatcatccttgaaccggggcgggtcatcgccggc
aatgcaggaattctggtcaccaaggtactctacactaagtccacacctagcaaggatttt
gtcatcgtggacgcggccatgaatgacttggtgcgcccctcgctctacggctccttccat
cgtattgccgaagtggtggagcataacaggcccaaaatcaacgtggatgtggtgggcccc
atctgtgagtcaggcgactttttggcccgtgatcgtgaactgccaaacgtggagtctggg
gaacttttggctgctttctcggctggagcttatggatttgccatgtcttcccagtataac
tcccgaccacgagcagccgaggtcatggtcgatggagaagtgaccgttttagctcgccgt
cgtgaaacttatgatgacctggttgccgctgagatgggctgtctagagcgtgttgtggac
tga
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