Devosia algicola: PSQ19_02240
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Entry
PSQ19_02240 CDS
T09919
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dag
Devosia algicola
Pathway
dag03410
Base excision repair
dag03430
Mismatch repair
dag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSQ19_02240 (recJ)
03430 Mismatch repair
PSQ19_02240 (recJ)
03440 Homologous recombination
PSQ19_02240 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dag03400
]
PSQ19_02240 (recJ)
DNA repair and recombination proteins [BR:
dag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PSQ19_02240 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSQ19_02240 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PSQ19_02240 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WDR03047
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Position
424044..425840
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AA seq
598 aa
AA seq
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MTQLPANFLDVTASVTGRSWVDRLDANQTRIAAAISQRTDASEILARVLAGRGVGVEDFE
AYLDPTLRGLMPDPSVMTDMDALAERLARATSNGEHVALFGDYDVDGASSCALMARYFAH
FGNQVTVHIPDRIFEGYGPNIAAMDSLIDAGATLIATLDCGTTSTAPIAHARGREVDVLV
IDHHLADHGLPEASALVNPNRPDDISGLGYLCAAGVTFMVLVAVNRLLRQQGVSQLPDLM
RLLDLVALATVCDVVPLKGLNRAFVVRGLEVARAGKNRGIAALALAARVNGPLNPYHLGF
LIGPRINAGGRIGDAALGTRLLSLDDEHQTLVIAAQLEELNGERQRIELDAVEEASRVAE
AEIGLGEGPSVLVLASANWHPGVVGLVAARLRERFERPAFAIALRPDGTGTGSGRSMPGV
DLGSAVIQAVSAGLIGKGGGHAMAAGVTLGHGQIGPFRAYLNEVLSAPVAAARAAAALSI
DAALTARGASVDFVREVERAGPFGSGNPTPIFAFPAHRIKFAQIVGKGGHVSFTLGAGDG
ATIKGIAFRAAGQPKGDALLNASSDTLLHVAGTLGVDHWQGRERVQLRLVDIARPKPL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
ttgacccaattgcccgccaacttccttgatgttaccgcctcggtcactgggcgtagctgg
gttgaccggttggacgctaatcagacccgtatcgctgccgcgatcagccagcgcactgat
gcctcagaaatcctcgcgcgcgtcctggcagggcgcggcgttggcgttgaggattttgaa
gcctatctcgatccaacccttcgcggcttgatgcccgacccctcggtgatgaccgacatg
gacgcgctggccgagcgtttggcacgcgccaccagcaacggtgaacatgtcgctctgttc
ggcgactatgatgttgatggcgccagttcctgcgccctgatggcgcgttattttgcccat
tttggcaatcaggtgaccgtgcatattcccgatcggatatttgagggctacggccccaat
atcgcggccatggacagtttgattgacgcaggcgcgaccctcatagcgaccctcgactgc
ggcaccaccagtacggcgcccatcgcccatgcgcgcgggcgggaagtcgacgttttggtg
attgaccatcaccttgccgatcatggcctgcctgaagcgagcgcactggtaaacccaaat
cgccccgatgatatctccggcctgggatacctttgcgccgctggcgtaacctttatggtg
cttgtcgcggtcaatcgtttgctgcgacagcaaggggtatcccagcttcctgatttgatg
cgactgcttgaccttgtggcattggcaacggtttgcgacgtagtcccgctcaaaggcttg
aatcgcgcgttcgtggtcagggggcttgaagttgcccgggcgggcaaaaatcgcggcatc
gcggcgttggcattggccgcgcgggttaatggcccgctaaatccctaccaccttggtttc
ctgatcgggccccggatcaatgccggcggcagaataggggatgcggcacttggaacgcgg
ctgttatcactcgatgacgagcatcagacactggtcatcgcggcacagttagaggaactg
aacggcgaacgtcaacgcattgaacttgacgctgtagaggaggcgagtcgcgtcgccgaa
gcagaaatagggctcggcgagggtccttcagtgctggttctggcgtcggcaaattggcat
ccgggcgttgtcgggctggtggcagcgcgattgcgcgaacgatttgagcgtccagccttc
gcgatcgcgctacgcccggacggtaccggcaccggatcggggcgctccatgcccggcgtt
gatcttggatcggccgtcattcaggcggtaagcgctggtctgattggcaagggcggtggc
cacgcgatggcggctggtgtcacactcggtcatggccaaatcggcccgtttcgagcctat
ctcaacgaagtgttgtcggcaccggtcgcggcagcccgcgccgcagccgcgctctctatc
gatgcggcactgacggcacgtggcgcttcagtggactttgtgcgagaggtagaacgcgcc
ggtccgttcggctccggcaaccccacgccaatctttgcctttccagcacatcggatcaaa
ttcgcccagatcgttggcaagggcggtcatgtcagcttcacccttggcgccggtgacggt
gccaccatcaaaggtattgcgtttcgcgcggcaggccagccaaaaggtgatgcacttttg
aatgccagcagcgacacacttctgcatgtcgcaggcacgctcggcgtcgatcactggcag
ggtcgcgagcgtgtccagttgcgactagtcgatattgcccgccccaaaccattgtga
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