Devosia algicola: PSQ19_09045
Help
Entry
PSQ19_09045 CDS
T09919
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dag
Devosia algicola
Pathway
dag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSQ19_09045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dag03019
]
PSQ19_09045
Enzymes [BR:
dag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PSQ19_09045
Messenger RNA biogenesis [BR:
dag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSQ19_09045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Big_10
Motif
Other DBs
NCBI-ProteinID:
WDR04125
UniProt:
A0ABY7YTE3
LinkDB
All DBs
Position
complement(1693183..1694709)
Genome browser
AA seq
508 aa
AA seq
DB search
MARHLKDLILTNFAELGLPELLVNSLARAGFNEPTKIQSEAIPPLLTGKDLMGIAQTGSG
KTAAFAMPILAGILTLTGRPRPLTTRALILAPTRELAVQIDEAIRKFAGSEMRLQTVLVL
GGVSRYHQVQRIARGVDVVVATPGRLKDLIDDGKLKLNETRWFVLDEADRMLDMGFIAPV
KHIARAIGPRRQTMLFSATMAPEVANLAKGLLNEPIRVDANPQGQTVVKIDQRVILSGSK
AKRGVLNELLAEPEMERVIVFSRTKHGADRVAKNLNIDGHKAAAIHGNKSQNARQAALKG
FSSGQVRLLVATDIAARGIDVPGITHVINYELPDDPENYVHRIGRTGRNGASGIAITLCD
GSERIKLRDVERLIRKSLPVSGELHLANDTGVVEAPRSAYKAKGNRGQQKPRGAQNPKKQ
GDRRSPAERRPFAAFGDGAGQPQRQSKPVEVNRADGQVTRVRRDSETGKPVGAKPAANKQ
RWGKTQKDAAKSTRRPEGGRRPRGERVA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgccatttgaaagaccttatattgactaattttgctgaactcggattgcctgaa
ttgcttgtcaactcgctggcgcgcgccggttttaacgagccgaccaagatacagtccgaa
gctataccgcctctgctaaccggcaaggatttgatgggcattgcccagacaggatcgggc
aagactgcggcatttgccatgccaattctggccggtatcctgacgttaaccgggcgcccg
cgtccgctgaccacacgcgccttgattctggcgccgacacgcgagttggcagtgcaaatt
gacgaggcgatccgaaagttcgccggatccgaaatgcgcctgcagactgtgctcgtgctc
ggtggcgtgtcgcgctaccatcaggtgcagcggatcgccagaggcgtcgatgtggtggtg
gcgacgcccggtcgcctcaaggacctgattgacgacggcaaactcaaactcaacgaaacg
cgctggtttgtgctcgatgaagccgaccggatgctggacatgggctttatcgcgccggtc
aaacatattgcgcgggccatcgggccacgccgccagacgatgctgttttccgccaccatg
gcgcctgaagtggccaatttggcaaagggtttgttgaacgagcccattcgcgtcgacgcc
aatccgcaaggccagacggtggtcaagattgatcagcgggtgatcctgtctggatccaag
gctaagcgcggggtgttgaacgaattgttggccgaacctgaaatggaacgggtgattgtg
ttctcgcgcaccaagcatggggctgaccgcgtcgccaagaacctgaatattgacgggcac
aaggctgccgcaattcatggcaacaagagccagaatgcccgtcaggcagcgctcaagggg
ttttcctcggggcaggtacgcctgttggttgctacggacattgccgctcgcggtatcgat
gtgcccggcattacccatgtcatcaattatgaattgcccgatgatcctgagaactatgtg
caccgtattggtcgcaccgggcgcaacggtgcgtcgggcatcgcgattacactgtgcgac
ggcagcgagcggatcaaactgcgcgatgtcgagcgcctgattcgcaaaagcctgccggtt
tccggcgagttgcacctggccaatgataccggtgtggttgaggcaccgcgttcggcctat
aaagccaagggcaatcgtggacagcagaaaccgcgtggcgcgcaaaatcccaaaaaacag
ggcgaccggcgttcgccggctgaacgtcgtccgttcgccgcttttggggacggggcgggc
cagccgcaacgtcaatccaagcctgttgaggtcaatagggccgatggtcaagtcacgcgt
gtgcgtcgcgatagcgagacgggcaagccggtcggtgccaagcctgcggccaacaagcag
cgttggggcaagacccagaaagatgcggccaaatctacgcgccgtcccgagggcggtcgt
cggccgcgcggcgagcgcgtcgcttaa
DBGET
integrated database retrieval system
