Devosia algicola: PSQ19_09955
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Entry
PSQ19_09955 CDS
T09919
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
dag
Devosia algicola
Brite
KEGG Orthology (KO) [BR:
dag00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dag01002
]
PSQ19_09955
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dag01011
]
PSQ19_09955
Peptidases and inhibitors [BR:
dag01002
]
Cysteine peptidases
Family C82
PSQ19_09955
Peptidoglycan biosynthesis and degradation proteins [BR:
dag01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PSQ19_09955
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
PG_binding_1
YkuD
Motif
Other DBs
NCBI-ProteinID:
WDR01196
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All DBs
Position
1868767..1870149
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AA seq
460 aa
AA seq
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MIAAFSGHAGPHGGKDFMIKLSVCLLASTLCLGMALPAAAQDVKVASTTLTRIVIAPPQT
ALARTIKTGLSAAYYGARRDTAAYDEAQKLYFFYGERHFEPLWLNQAADGSLAFSPTAQA
IVSIFADAAKEGLRPTDYLTPNLDVAAAAGDPAKMAALETAFSAALVRYADNLLNGRIRP
GSISSDLDIAPKSLDATQLLLDIAKGQDPKTVLAKFEPKHREFLQLKSALANFDADAKND
KVSIPSGPSLRLGMSDERVQLLRQRLDLTDTVDDPSIYDAAIVAAVKDFQASKSLTADGI
AGPATIAALNGGPTVTRDDIIANMERWRWMPTDLGDFNVLVNVPEYRLSVNQNGKSIYST
RVVVGSKAHPTPIFSDNIRHLVVNPYWNVPSSIIKNEIAGKTLANPNYIASQNMDLIYNG
NVISANQVNWSEPRQQLSVPRTPASRCEQCIGSDQVPVPQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcggcgttttcagggcacgctggtccgcacgggggtaaagatttcatgatcaag
ctgtcagtttgcctgctcgccagcacgctttgcctgggaatggctcttcctgcagccgcc
caggatgtcaaagttgccagcacgaccttgacccgtattgtcattgcgccgccccagaca
gcactagcgcgaaccatcaagaccggactgtccgctgcctattatggcgccagacgcgat
accgccgcctatgacgaggctcaaaagctctacttcttctatggcgagcgccactttgag
ccactttggctaaatcaggctgccgacggtagtttggctttttctccgaccgctcaagct
atcgtctcgatctttgccgatgccgccaaagagggactgcgcccaacagattatcttacg
cccaacctcgatgtggcggctgccgctggcgatcctgcaaaaatggcggcgcttgagaca
gcgttttcagcagcgctggtgcgctatgccgacaatcttctcaatgggcgcattcggccg
ggatcgatatcctccgatctcgacatcgcccccaagtcactcgacgcgacccaattgctt
ctcgatatcgccaagggtcaggatcccaaaactgtgcttgcgaaatttgagcccaagcac
cgcgagtttctgcagctcaagtctgccctcgccaattttgatgccgacgccaaaaacgac
aaagtctcgattccgagcggaccttcattgcgtttgggaatgagcgacgagcgcgttcag
ttgctgcgtcaacgcctcgatttgaccgacacggtcgacgatccgtcgatttacgacgca
gcgattgtcgcggcggttaaagatttccaggccagcaaaagtctgactgcagatggcatc
gctggtccagcaacgatcgctgcgttgaatggcggccccaccgttacccgcgatgacatt
atcgcgaacatggaacggtggcgctggatgccgaccgatctgggcgatttcaacgtgctg
gtcaatgttcctgagtaccgtctttccgttaatcagaatggcaagtcgatttattccacc
cgtgtcgttgtcggcagcaaggcccatccgacaccgattttttcggacaatattcgtcat
ctggtggtcaatccatactggaacgtgcccagttcgatcatcaaaaacgagatcgccggc
aagacgctggccaatcccaactatattgccagccagaacatggatctgatctacaatggt
aatgtgatcagcgccaaccaggtcaactggtcagagcctaggcaacagctttccgttccg
cgtacgccagcgtcccggtgcgagcaatgcattgggtcggatcaagttcctgttccccaa
taa
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