Devosia algicola: PSQ19_13370
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Entry
PSQ19_13370 CDS
T09919
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
dag
Devosia algicola
Brite
KEGG Orthology (KO) [BR:
dag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dag03016
]
PSQ19_13370 (thpR)
Enzymes [BR:
dag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PSQ19_13370 (thpR)
Transfer RNA biogenesis [BR:
dag03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PSQ19_13370 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
WDR01727
LinkDB
All DBs
Position
complement(2520748..2521296)
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AA seq
182 aa
AA seq
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MPRLFTGLEVPTDIGFALSLKRGGLQGARWLDPENYHITLRFIGDVDNGTANEVADGLDR
LTNSAAFSIKLNHLGAFGGDKPRALYAGMEGNEALLRLQAAQERVLQRIGLAPEGRKFVP
HIALARLRGATAGDLARFMAMAGRFEPLSFAVPRFVLFSSRDSVGGGPYLIEQSYALSEF
VA
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgccccggctctttaccggtcttgaagtgccgacggatatcggcttcgcgctgtcactc
aagcggggtggcctgcagggcgcacgctggctcgatccggaaaattatcacatcaccctg
cgctttatcggcgacgtcgacaatggcaccgccaacgaggtggccgacggtctggaccgg
ctaaccaactccgccgctttttccatcaaactcaaccatctgggcgcctttggcggcgac
aagccgcgggcgctttatgccggaatggaaggcaatgaggcgctgttgcggctgcaggcc
gcgcaggagcgggtgctgcagcgaattggtctggcgccggaagggcgcaaatttgtaccc
catattgccctggcccggttgcgcggggccacggctggcgatctggcgcggttcatggcc
atggcgggccgatttgagccgctcagctttgcggtgccgcgcttcgtgctgttttcgagc
cgcgattcggtggggggcggcccttatctgatcgagcagagctacgccttgagcgaattt
gtggcctga
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