Devosia algicola: PSQ19_13460
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Entry
PSQ19_13460 CDS
T09919
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dag
Devosia algicola
Pathway
dag00300
Lysine biosynthesis
dag00470
D-Amino acid metabolism
dag01100
Metabolic pathways
dag01110
Biosynthesis of secondary metabolites
dag01120
Microbial metabolism in diverse environments
dag01230
Biosynthesis of amino acids
Module
dag_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dag00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSQ19_13460 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSQ19_13460 (dapF)
Enzymes [BR:
dag01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PSQ19_13460 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WDR04322
UniProt:
A0ABY7YSZ4
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Position
complement(2537780..2538637)
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AA seq
285 aa
AA seq
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MNGLGNQIIVADMRGRPGRVRPAAAVALNGDEATRFDQIMAIHDPRTPGTANYIEIINSD
GSSAQACGNGMRCVVQALAAQSGQTSFLFETVAGILTADEHEDGLISVDMGVPRFGWQDI
PLAEEFADTRKIELQIGPIDAPVLHSPSVASMGNPHAIFWVKDDVWHYALDRFGPMLENH
PIFPERANISIAQVTANDAMILRTWERGAGLTRACGTGACAAAVNGFRTRRTGRQVTVTV
PGGDLHIDWRDNDHVVMTGPAELEWSGTVDPATGEWSRALADATK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtttgggcaaccagatcatcgttgccgatatgcgcggccgtccgggtcgggta
cgtccggctgcggcggtggcgctcaatggcgacgaggccacccggttcgaccagatcatg
gccattcacgatcccagaacaccgggcacggccaattatatcgagatcatcaattctgat
ggttcctcggcccaggcctgtggcaatggcatgcggtgtgtggtgcaggcactcgcagcg
cagagtggccagaccagcttcctgtttgaaaccgttgcggggattttgacggctgatgag
catgaggacggactgatttcggttgatatgggcgtgccgcgctttgggtggcaagacatt
cccttggctgaggaatttgccgacacccgcaagatcgaattgcagatcggcccgatcgac
gcgccggtgctgcattcgccttcggtggcctcgatgggtaatccgcatgctattttctgg
gtcaaggatgatgtttggcattatgcgctcgaccggttcgggccgatgctggaaaatcat
ccgatctttcccgaacgcgccaatatttcaattgcccaagtgactgccaatgacgccatg
atcctgcggacgtgggagcgcggggcggggctgacgcgggcttgcggcacaggcgcgtgc
gcggcggcggtcaatggcttccgaacccgccggaccggccgtcaggtcacggtaacggtg
ccgggtggcgatctgcatatcgattggcgcgacaatgatcatgtggtcatgaccgggccg
gccgaactggaatggtctggcacagtcgatcccgccaccggagaatggtcgcgcgcgtta
gcggatgcgaccaaatga
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