Devosia algicola: PSQ19_15715
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Entry
PSQ19_15715 CDS
T09919
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
dag
Devosia algicola
Brite
KEGG Orthology (KO) [BR:
dag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dag03400
]
PSQ19_15715 (addB)
Enzymes [BR:
dag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSQ19_15715 (addB)
DNA repair and recombination proteins [BR:
dag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PSQ19_15715 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WDR02100
LinkDB
All DBs
Position
2938667..2941669
Genome browser
AA seq
1000 aa
AA seq
DB search
MNPVYSIAPHAKFLTTLADRVIDGTLLGGWDNSGPFGLSDVTIVLPTRRARLTLAEIFAE
RGVGLLPDIRTFGGEDKEEEPFLPPIDVSILPAPVSLVERRLVLSRLVSLWAVSDDGRQA
LASPPNAAEVLKLAESLGGLIDDLAAEGCTPQQLDAIVPADLATNWQQTLKFLQIVFRAW
PEILGERQKADKSVLRNERLLRQAMAAPLVYGDKPVIAAGSTGSIPATAALLKAIAALPH
GAVVLPGVDTTLSAAAHETLLDPISNSHGHPQYGLAKLLRTLGQTMGNVIELADADHART
VLVRHALALSPDTAYWAQNRLAPNQLTAAGKGLTLLSARTEDEEARAIALAARDGLVRGK
SVGIVTPDQNLARRIAAELGRFDIRVDDAAGAPLFHAPAGRLLRQILALATRNFAPVDLM
AILRNRACVLGTSRAEISPVADLVEMGVLRGQRPNPGVTGLRALLTANVDETTKYPVRRL
TSADAAAIEILLTRLEQAMAPLMTALSQAHLTAGGFVDALLAANERIANADIGGAAELAL
WGREVRAQGAEGITFEPVGLDGVLQALMQGFEVRNVMARRDDIAIWGQLEARLQNPDLLI
IAALNEDIWPEAADPGPWLSRQMRLAAGLEPPERKAGLAAHDFAMALGNGEIIVAFSERL
GTSPAIASRLVQRLEAFAGEATGTLWRQRGEKWLAEARALDATAAPRAASMPVPNPPPSI
RPRRLSITEIETLFRSPYDLYAKHVLNLKPMDPLGEEAGGRERGSIIHDIFGRFVEEGND
VMAANALATLNELAQDGFSGLDAIGERRDIWMRRFTTAAQLFLDFERGRNHLVCQRHAER
SGKWDLQLSQPFTLSGRADRIDEMLDGTLEIIDFKTGTPPGPGEMKRFEAPQLLLEAAMA
HVGAFADIAAADTSNLSYIKIGLGPDAFIEKPFALDDGFDLMGAADEAAIRMQRHVAEFL
FNQRPMIPRLFPLSNQRYAGAYDHLARTAEWSLTAGEDSA
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtctattccattgccccacatgccaaatttctgacaacgcttgccgacagg
gtcattgatggcacgctgttgggcggttgggataatagcggaccatttggtctcagcgat
gtcaccatcgtgctgccgacccgccgcgcccgcctgactttggccgaaatatttgccgag
cgcggcgtcggcctgttgcccgacattcgcacctttggcggcgaggacaaggaggaagaa
cccttcctgccgccgatcgatgtcagtattttgccggcgcccgtgtcgctcgtggagcgg
cgtctggtattgtcgcgactggtcagtctctgggctgtttccgacgatggcaggcaggct
ctggcctcgccgcccaatgccgctgaagtgctcaaactcgctgaatcccttggcggtttg
attgacgatctggcggccgaaggttgcacccctcagcaactcgacgccatcgttccagca
gatctggcaaccaactggcagcaaacgctgaaatttcttcagattgttttccgggcttgg
ccagaaattctgggggagcgccaaaaggctgacaaatcggtgttgcgcaatgaacgtctt
ttgcgccaggccatggccgcacccttggtttatggcgataaaccggtaatcgccgcgggc
tcaaccggctcgattccagcaacagcggcgctactcaaagcgattgcagcgctgccgcac
ggtgccgttgtgctgccgggcgtcgatacaacattgtccgcagcagcgcacgagacgctt
ttggatcccatcagcaattcgcatgggcacccgcaatatggcctggccaaactgctgcga
actctgggtcagaccatgggtaacgtcatagaactggccgacgccgatcatgcccgcaca
gtgttggtgcgtcacgcgctggcgctgagccccgacaccgcctattgggcgcaaaaccgg
ctggcaccgaatcaactgaccgccgcgggcaaaggcctcaccttgttgagcgcccgcacc
gaagatgaggaagcgcgcgccatcgcgctggcggcgcgcgacgggctggtgcgcggcaaa
agcgtgggcatcgtcacgcccgaccaaaatctggcccggcggatcgccgcagaactaggg
cgcttcgatatcagggttgacgacgcggctggcgcgccgctgtttcatgccccggcgggg
cgactgctccgacagatactggcgctggcaacgcgaaatttcgccccggtcgatctgatg
gccatattgcggaatcgtgcctgtgtactgggcacgagtcgcgccgaaatcagtccggtc
gccgatctggttgaaatgggcgtgctgcgcggccagcggcccaatccgggcgttactggt
ctccgtgccctgctgacggccaatgtcgacgaaacgaccaaatatcccgtccgcaggctt
accagcgctgatgcggctgccatcgaaatcctgctgacgcgtctcgaacaggccatggcg
ccgctgatgaccgccttgtcacaggcgcatctcacggcaggcggttttgttgatgcgctg
ctcgccgccaacgagaggattgccaacgccgacattggcggtgcggccgagctggcgctt
tgggggcgcgaggtaagagcacagggcgctgaaggcatcacatttgagccggtcggtctt
gatggtgtcctgcaggcattgatgcagggctttgaagtgcgcaatgtcatggcaaggcgc
gacgatattgctatctgggggcaactcgaagcccgcctgcaaaatcccgatctcctgatc
attgcggcactcaatgaggatatctggcccgaagcggctgaccccggcccatggctgagc
cggcaaatgcggctggctgcagggttggagccacctgagcgcaaggcgggtctggccgcg
catgactttgccatggcgctgggcaatggtgaaattatcgtggcattctccgagcgtctg
ggcaccagtccggcgattgcctcacgattggtgcaacggctcgaagcctttgccggagag
gcgacgggaacgctctggcgccagcgcggtgaaaaatggctcgcggaggcgcgcgccctt
gacgcaacggccgcgcccagggcagcctcgatgccggtgcccaatccaccgccgagcatt
cgacctcggcgattgtcgatcaccgaaatcgaaacgctgttccgctcgccctatgacctt
tatgccaagcacgttctcaacctcaaaccgatggacccgctgggtgaggaagcgggcggg
cgtgaacgaggcagcatcatccacgatatttttggccgatttgtcgaggagggcaacgat
gtaatggccgccaatgccttggcgacactcaatgaactggcgcaagacggattttctggc
ctcgacgcgattggcgagcggcgtgacatctggatgcgtcggttcacaacggcagcgcaa
ctgtttcttgactttgaacggggtcgtaatcatctggtgtgccagcgtcatgcggaacga
tccggaaagtgggatctgcagctgtcccaaccctttacgctctccggtcgggccgaccgg
atcgatgagatgcttgatggcacgctggaaatcatcgatttcaagacagggacaccgccc
gggcccggcgagatgaaacggtttgaagcaccccagctattgctcgaagccgcaatggca
cacgtcggcgccttcgccgatatcgccgccgccgacaccagcaacctcagctatataaaa
atcggtttgggccctgacgcattcatcgaaaaaccgtttgcgctcgatgacgggtttgac
ctgatgggcgccgccgatgaagccgcgatcaggatgcagcggcacgtggccgagttcctg
ttcaatcagcgccccatgataccaaggctgtttcccttgtcgaaccagcgctatgccggt
gcctatgatcatctggcccgcaccgcggagtggagtttgacggcaggggaggacagcgcg
tga
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