Deinococcus aetherius: DAETH_15980
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Entry
DAETH_15980 CDS
T08646
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dah
Deinococcus aetherius
Pathway
dah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DAETH_15980 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dah03021
]
DAETH_15980 (rho)
03019 Messenger RNA biogenesis [BR:
dah03019
]
DAETH_15980 (rho)
Transcription machinery [BR:
dah03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DAETH_15980 (rho)
Messenger RNA biogenesis [BR:
dah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DAETH_15980 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
AAA_22
NACHT
Spore_III_AA
ATPase_2
AAA
AAA_24
MMR_HSR1
nSTAND_NTPase5
FeoB_N
Motif
Other DBs
NCBI-ProteinID:
BDP41629
UniProt:
A0ABN6RFH0
LinkDB
All DBs
Position
complement(1599786..1601066)
Genome browser
AA seq
426 aa
AA seq
DB search
MTDSVTQGPLPFHELQQKILPELHLIAASHGIENYRKLKKDSLALAIMERQAGAEGQILA
RGFLDISPDGYGFLQSNLLDPTSRSTLVTAGVIKGFHLRTGDEVIGRARRPRENERYGTL
VQVEAVNGLDPEAARNRPRFDDLTPTFPDAQLVLEDPGMDDGLSLRVVDLLVPIGRGQRA
LIVAPPKAGKTTLLKKIANSIVKNYPDVTVMVLLVDERPEEVTDFRESVQGAQVIASTFD
EPPQHHVRVAEFVHERARRIVEDGGHVVILLDSITRLARANNLVTPPTGRTLSGGLDSNA
LHWPKRFLGAARNIRDGGSLTILATALVETGSRMDDVIFEEFKGTGNAELVLSRRLEERR
IFPALDILKSGTRREELLLQPEVLKKMWLLRKVISDMDPADAMEMLLTRMGKTRNNVEFL
QSLAGG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgattccgtcacccaagggccgctgccctttcacgaactccagcagaagatcctg
cccgaactccacctgatcgccgccagccacggcatcgagaactaccgcaagctcaaaaag
gactcgctcgccctcgccatcatggagcggcaggcgggcgccgagggccagatcctcgcc
cggggcttcctcgacatcagccccgacggctacggcttcctgcagtcgaacctcctcgac
cccacgtcgcgctccaccctcgtcacggcgggcgtgatcaaggggtttcacctgcgcacc
ggcgacgaggtcatcggccgcgcccgccgcccgcgcgagaacgaacgctacggcaccctc
gtgcaggtcgaggcggtcaacggcctcgaccccgaggcggctagaaaccggccgcgcttc
gacgacctcacccccaccttccccgacgcccagctcgtgctggaagatcccggcatggac
gacggcctctccctgcgggtggtggacctcctcgtgcccatcgggcgggggcagcgcgcc
ctgatcgtcgcgccccccaaggcgggcaagacgacgctgctcaagaagatcgccaactcc
atcgtcaagaactaccccgacgtgacggtgatggtcctgctggtggacgagcgccccgag
gaggtcaccgacttccgcgagagcgtgcagggggcgcaggtcatcgcctccaccttcgac
gagcccccgcagcaccacgtccgggtcgccgagttcgtccacgagcgggcccggcgcatc
gtcgaggacggcgggcacgtcgtcatcctgctcgactcgatcacccgcctcgcccgcgcg
aacaacctcgtcaccccacccaccgggcgcaccttatcgggcggcctggattcgaacgcg
ctgcactggcccaagagattcctcggcgcggcgcgcaacatccgggacggcggcagtctc
accatcctggcgaccgccctggtggagacgggctcgcggatggacgacgtgatcttcgag
gagttcaagggcaccggcaacgccgaactcgtgctcagccgacgcctggaggaacgccgc
atcttccccgcgctcgacatcctcaagtcgggcacccgccgggaggaactgctgctccag
ccggaagttctcaagaagatgtggctgctgcgcaaggtgatctccgatatggaccccgcc
gacgcgatggagatgctgctgacccgcatgggcaagacccgcaacaacgtcgagttcctg
caatccctcgcggggggctga
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