Deinococcus aetherius: DAETH_16760
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Entry
DAETH_16760 CDS
T08646
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dah
Deinococcus aetherius
Pathway
dah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DAETH_16760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dah03019
]
DAETH_16760
03400 DNA repair and recombination proteins [BR:
dah03400
]
DAETH_16760
Enzymes [BR:
dah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DAETH_16760
Messenger RNA biogenesis [BR:
dah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DAETH_16760
DNA repair and recombination proteins [BR:
dah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DAETH_16760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
RecQ_Zn_bind
Helicase_C
HHH
Motif
Other DBs
NCBI-ProteinID:
BDP41707
LinkDB
All DBs
Position
complement(1670820..1673165)
Genome browser
AA seq
781 aa
AA seq
DB search
MTAAPASSNSTATDQRALTVLKSVWGYDAFRGVQADIVRTVSEGGNALVLMPTGGGKSLC
YQVPSLLRPGVGIVVSPLIALMKDQVDALRQVGVRAAFLNSTLQAEGVREVEAALVAGDL
DLLYVAPERLLLDRTLDLLARSPVALFAIDEAHCVSQWGHDFRPEYGQLGVLPQRFPHLP
RVALTATADERTREDILRVLGLHGAPQFVSSFDRPNIQYRVANKEGPKTQLLDFIQAEHT
GDAGIVYCLSRKSVEETAKWLQAQGVDALPYHAGLSPRERNLAQDRFLNEEGMVVVATVA
FGMGIDKPNVRFVAHLDLPKSMEGYYQETGRAGRDGLPSTAWMVYGLTDVVNVKRMLDQS
LAPPEVKRVEAAKLDALLTYCEAATCRRQVLLSYFGETLEAPCGNCDVCLQPPRVRDATR
EAQMALSAAVRTGNRFGAAHLTDVLLGRETDKVRAMGHHALPTFGVGREHDEKTWRGLLR
QLVSLGYLTAGEHHGLSSTPKARALLRGEATLMLREETLVPKPARRERDRSARKGGAPVD
AQDRPLFEALRQWRLTKAREQGVPPYVIFADSTLKTIAELRPGSLNTLGSVSGVGARKLE
AYGAEVLEVVRGQVGSRQPSVVSRQPTSAERGTADNVAVLGLLRGGGQVSPSPRTATPER
EVRPTALFSPGVTDEPHAATRPQPEPRPAPLPAPTPQATSDTPPAPPNPEVAGTLRELRR
ELSRETGHSAFVIFPNATLEALAVRQPRTLAELRGVPGLGEKRIEAYGERIVDAVLTALD
G
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgcccccgcctcctcgaacagcacggccaccgaccagcgcgccctcaccgtc
ctgaaaagcgtctggggttacgacgccttccggggcgtgcaggccgacatcgtgcgcacg
gtgtcggaagggggcaacgcgctcgtcctgatgccgacgggtggcggcaagagcctgtgc
tatcaggtgccctcgctgctccgtcccggcgtggggatcgtcgtctcgccgctgatcgcg
ctgatgaaggatcaggtggacgcgctgcggcaggtgggcgtgcgggcggccttcctcaac
tccacccttcaggcggagggggtgcgggaggtggaggcggctctggtcgccggggacctc
gacctgctgtacgtcgcgcccgagcggctgctgctcgaccgcaccctcgacctgctggcc
cgctcccccgtcgccctcttcgccatcgacgaggcccactgcgtctcccagtgggggcac
gacttccggcccgagtacgggcaactcggcgtgctgccgcagcgtttcccccacctcccg
cgcgtggccctcaccgccaccgccgacgagcgcacccgggaggacatcctgcgggtgctc
ggtctgcacggggcgccgcagttcgtctcctccttcgaccgcccgaatatccagtaccgg
gtggcgaacaaggaggggcccaagacccagcttctcgacttcatccaggccgaacataca
ggcgacgcgggcatagtgtactgcctctcgcgcaagtcggtggaggagaccgccaagtgg
ctccaggcgcagggggtggacgcgctgccgtaccacgcgggcctctcgccgcgcgagcgc
aatctggcccaggaccgctttctcaacgaggaggggatggtcgtcgtcgccacggtcgcc
ttcgggatgggcatcgacaagcccaacgtgcgcttcgtggcccacctcgacctgcccaag
agcatggagggctactaccaggagacgggccgcgccgggcgcgacggcctgccgagcacc
gcctggatggtctacggcctgaccgacgtggtgaacgtcaagcggatgctcgaccagagc
ctcgcgccccccgaggtcaagcgggtggaggccgccaagctcgacgccctgctgacctac
tgcgaggccgcgacctgccgccgccaggtgctcctctcgtacttcggggagacgctggag
gctccgtgcggaaattgtgacgtgtgccttcagcccccccgcgtccgcgacgccacccgc
gaggcgcagatggccctctcggcggcggtgcggaccgggaaccgcttcggcgcggcgcac
ctcaccgacgtgctgctgggccgcgaaaccgacaaggtgcgcgcgatgggccaccacgcc
ctccccaccttcggggtcgggcgtgagcatgacgagaagacgtggcgcggcctgttgcgg
caactcgtcagcctcggctacctcacggcgggcgagcaccacggcctgagcagcacgccc
aaggcccgcgcgctcctgcggggcgaggcgaccctgatgctccgggaggaaacccttgtc
cccaagcccgcccgccgtgagcgcgaccgctccgcccgtaagggaggcgccccggtggac
gcccaggaccgccccctcttcgaggccctgcggcagtggcggctgacgaaggcgcgagag
cagggcgttcccccttacgtgatcttcgccgactcgaccctgaagaccatcgccgaactg
cgcccgggcagcctcaacaccctgggcagcgtgagcggcgtgggcgcccgcaagctggag
gcctacggggcggaggtgctggaggtggtgcgggggcaggtggggagccgtcagccgtca
gtggtcagccgtcagcccaccagtgccgagcgggggacggcggacaatgtcgcggtgcta
ggtctcctgcggggaggtggtcaggtcagcccctcgcccaggacggcgaccccagagcgg
gaagtccggcccaccgcgctcttctctccgggcgtcacagacgagccccacgcggccacc
cggccccagcccgaaccccgccccgctcctctcccggcccccactccacaagccacgagc
gacacgccacccgctccccccaaccccgaggtcgctgggaccctgcgtgaactgcgccgc
gaactctcccgcgagacggggcacagcgcctttgtgatcttcccgaacgcgaccctggag
gccctggccgtgagacagccccgcaccctcgccgagttgcgcggggtgcccggcctgggc
gaaaagcgcatcgaggcgtacggcgagcgcatcgtggacgcggtgctcacggcgctggac
gggtag
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