Deinococcus aetherius: DAETH_47890
Help
Entry
DAETH_47890 CDS
T08646
Symbol
hup_3
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
dah
Deinococcus aetherius
Brite
KEGG Orthology (KO) [BR:
dah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dah03032
]
DAETH_47890 (hup_3)
03036 Chromosome and associated proteins [BR:
dah03036
]
DAETH_47890 (hup_3)
03400 DNA repair and recombination proteins [BR:
dah03400
]
DAETH_47890 (hup_3)
DNA replication proteins [BR:
dah03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DAETH_47890 (hup_3)
Chromosome and associated proteins [BR:
dah03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DAETH_47890 (hup_3)
DNA repair and recombination proteins [BR:
dah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DAETH_47890 (hup_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2780
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
BDP44820
LinkDB
All DBs
Position
pDAETH-4:1641..2015
Genome browser
AA seq
124 aa
AA seq
DB search
MRTVTKTSKKAPANKPAATPAEPAGQVESGTPGKVTKTTLVDAVVTQTGLTKKQADGAVD
AALGAVADALRQGQSVGLPGVGTLSVKATAARSGVRPGTTERIEIPAGKKVAFKVASTLK
DSLR
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccgtgaccaaaacatcgaagaaggcccccgcgaacaagcccgccgccacccct
gccgagcccgccgggcaggtggagtccggcacgccgggcaaggtcaccaagaccacgctc
gtcgacgccgtggtgacccagaccggcctcacgaagaagcaggcggacggggccgtcgac
gcagccctgggcgccgtcgcggacgccctgcgacagggacagtcggtgggcctaccgggc
gtcgggaccctcagcgtgaaggccaccgccgcccgcagcggcgtccggccggggaccacc
gaacgcatcgagatccccgccggaaagaaggtcgcgttcaaggtggcgagcacactcaag
gattctctgcgatga
DBGET
integrated database retrieval system
