Desulfosporosinus acidiphilus: Desaci_0240
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Entry
Desaci_0240 CDS
T02148
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
dai
Desulfosporosinus acidiphilus
Brite
KEGG Orthology (KO) [BR:
dai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dai03400
]
Desaci_0240
DNA repair and recombination proteins [BR:
dai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Desaci_0240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
DUF7125
AAA_22
nSTAND_NTPase5
ChlI
NTPase_1
NPHP3_N
nSTAND3
AAA_30
AAA
KdpD
AAA_19
nSTAND_NTPase7
AAA_14
HypA
Oxidored_nitro
Thymidylate_kin
RecA_N
AAA_35
TK
ATPase_2
MeaB
NACHT
AAA_16
SLFN-g3_helicase
AAA_24
DUF7130
Motif
Other DBs
NCBI-ProteinID:
AFM39314
UniProt:
I4D0J0
LinkDB
All DBs
Position
239668..241155
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AA seq
495 aa
AA seq
DB search
MLVLGIHRNRLGNYARSGFESLQTDRITEVRLVMKVKIIYRCSSCGSESPKWLGKCPNCE
EWNTFEELVSQPIVEKQSVKRAISVKKLSDVLAGNSDRIVTGILEFNRVLGGGIVKDSII
ILTARPGAGKSTLLLQVADDVASQGYKVLYASAEESDAQIKKRADRILNGSNHNIWVYSD
TSMDHVLQAVDELDPDLIIIDSIQTFTLEEHHSRPGSPIQTMGCANELLKIAKNNERPRA
VIMVGQMTKEDEIAGLRALEHLVDAVLILNGENGEELRGAWCSKNRFGSTGEMGFFSMTE
KGMLSIDNPSEFFMTQRSEGQIVSGSALAVIKEGTRPIIVEVESLVSRSFTPYPSRIAEC
LRRDQLNTLISILEQRGKINLYDKNVVIKTTGGLQLKEQAVNLAIIMCIVSSVKDKAIPN
DTVFVADVGLTGELKKVPAIEARIREIDRMGFRRVYVPRNTVREPSRFKNLEIVELNTLY
DVILDLNMKAGEQYA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgctagtcttaggaattcatagaaacaggctgggaaattatgcgcgctcagggtttgaa
agcctgcaaacagatcggatcacagaagtgaggttggttatgaaagttaagattatttat
cgatgttcgagttgtggcagcgaaagcccaaagtggttaggaaaatgcccgaattgtgaa
gaatggaacacctttgaagaactagttagtcaaccgatagtggaaaaacaaagcgtgaaa
cgggcgatttccgtcaagaagttatcggacgttttagcaggcaatagtgacagaatcgtt
accggcattcttgaatttaaccgagtcctgggcggaggaattgttaaagattctatcatt
atactcacagccagaccgggagcaggaaagtcaaccttgcttttacaggtggctgatgat
gtcgcctctcagggttataaggtgctctatgcctcggcagaagagagtgatgctcaaatt
aaaaaacgagcagacagaattttaaacggaagcaaccacaacatttgggtatactccgat
acaagtatggatcatgtcttgcaggcggtagatgaattagacccagatttaattattata
gacagcattcaaaccttcactttggaagaacatcattcacgtcccggttctcctattcag
actatggggtgcgccaatgaacttctgaaaattgccaagaataatgagcgtcccagggca
gttattatggtaggacagatgacaaaggaagatgaaattgccgggttacgggccttggag
cacctagttgacgcagtgttaattttaaatggagaaaatggcgaagaattacggggagcc
tggtgctcgaaaaacaggttcgggagtacgggagaaatgggctttttctctatgaccgaa
aaagggatgctttccattgataatccttctgagttctttatgactcagaggtcggaaggg
caaatcgtttccgggagcgctttagcggttatcaaagaggggacacgtcctatcattgtg
gaggttgaaagtcttgtttcaagatcctttactccctatccctcaagaattgccgaatgt
ctaaggcgtgatcagctaaatactttaatctcaattctcgagcagcgggggaagataaac
ctctacgataaaaacgtggtgatcaaaactacggggggacttcaacttaaagaacaagcg
gttaatttggcaattattatgtgtattgtatcttcagtcaaggataaagcaattcctaat
gacacagtgtttgtagctgacgtaggattgacaggagagcttaagaaggtcccggccatt
gaagctaggattcgggaaattgaccgcatgggattcaggcgcgtttatgtaccaagaaat
actgtgcgagaaccgtcgagattcaaaaacctggagattgttgagctaaatacgctctac
gatgtaatattagatttaaatatgaaggccggggaacaatatgcctga
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