Desulfosporosinus acidiphilus: Desaci_0483
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Entry
Desaci_0483 CDS
T02148
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dai
Desulfosporosinus acidiphilus
Pathway
dai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Desaci_0483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dai03021
]
Desaci_0483
03400 DNA repair and recombination proteins [BR:
dai03400
]
Desaci_0483
Enzymes [BR:
dai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Desaci_0483
Transcription machinery [BR:
dai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Desaci_0483
DNA repair and recombination proteins [BR:
dai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Desaci_0483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Peptidase_M23
DUF7351
Motif
Other DBs
NCBI-ProteinID:
AFM39549
UniProt:
I4D175
LinkDB
All DBs
Position
491562..494996
Genome browser
AA seq
1144 aa
AA seq
DB search
MLDVNNFDRMRIGLASPDMIRDWSFGEVKKPETINYRTLKPEREGLFCEKIFGPTRDWEC
HCGKYKRVRYKGIVCDRCGVEVTRSKVRRERMGHIVLAAPVSHIWYFKGIPSRMGLLLDM
SPRALEKVLYFVSYIVTDPGDTSLMKKQLLTETEYREYKDKYGDRFQASMGAEAVKLLLT
EMDLDKLNDELRGELKEVSGQRKIRAIRRLEVVEAFKQSGNRPEWMIMDVVPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVRNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKLHQCGLPKE
MALELFKPFVMKKLVNEGHAHNIKSAKRMVERVRPEVWDVLEEVITDHPVLLNRAPTLHR
LGIQAFEPILVEGRALQIHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLASHNIL
NPKDGRPVQTPTQDMVLGSYYLTMERPGAFGEGKIFKDFNEAVLAYDTGEVHLQAKIKVR
RDDGLLETTVGRLIFNSVIPKEIGYFNEVVGKKGLGEIVAKTYRIAGYEATASLLDGLKS
QGFKFSTRAGMTVGLTDITVPEAKTEILSNADQAVAKTELQYRRGLITDEERYNLVIDTW
AKATKTVTDALMESLNQFNPVYMMATSGARGNIQQLRQLAGMRGLMADPSGRTIELPIKA
NFREGLTVLEYFISSHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREEDCGTSAGII
VEDIKDGPEIIESLEERLVGRFVLEDLYHPTTGKLLATPEKEMTEEQAKEIAAVFDSVVI
RSVLACTSRYGVCKKCYGRNLATGRPVEMGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAG
DDITQGLPRVEELFEARKPKGQAIISEVKGKVSISEVKGRREVEITTDSDEHITYTIPYG
SRLSVKDGQMVEAGDELTEGSINPHDMLKVKGQRGVQVYLVGEVQRVYRLQGVDINDKHI
EVMVRQMLRKVKIDDAGDTSLLPGGLIDIFDFQDENAKAIANGGEPAVAHAVLLGITKAS
LATDSFLSAASFQETTRVLTEAAIKGKVDPLLGLKENVIIGKLIPAGTGMARYRNIKTFD
ANPV
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
ttgctagacgtcaataatttcgaccgtatgcgtatcggcttagcttcgccggatatgatt
cgtgactggtcctttggagaagttaagaagcctgaaaccattaactatcggaccttaaag
ccggaacgggaaggattgttttgtgaaaagatctttggcccgaccagagattgggaatgc
cactgcggaaaatataaacgggtacgttacaagggtattgtttgcgatcgctgcggagtt
gaagtcactcgatcgaaggtgcgccgtgagcggatgggacatattgtcctggccgctcca
gtttcccatatatggtatttcaaaggaattcccagcaggatgggtctgcttttagatatg
tccccccgtgctctggaaaaggtcctctattttgtttcctatattgtgacagaccccgga
gatacttctctgatgaaaaagcaacttctaacggaaacagaatatcgtgaatacaaagac
aagtatggagatcgtttccaggccagtatgggtgctgaggcagttaaactcctgctcaca
gaaatggatctggataaacttaatgacgagctgcgcggcgaactgaaagaagtttccggg
caacggaaaatccgtgctattcgtcgtttagaagtagtcgaggcctttaagcaatcagga
aatcgcccggaatggatgattatggatgttgtgccggttatcccgcctgaactgaggcct
atggttcaattagacggcggcaggtttgcaacttctgatcttaacgacctatatcgacgg
gttattaatcgcaataatcgcttaaagcgacttttagatttaggagctcctgatattatt
gtgcgcaatgagaaacggatgctccaagaagctgttgacgccttaattgacaacggccgt
cgaggtcgtccggtaacaggaccggggaaccgcccgctgaaatctctaagcgacatgctg
aaaggaaaacaaggacgtttccgtcaaaaccttttaggaaaacgcgtagactattcggga
cgttccgttattgttgtcggaccaaaccttaaattgcatcaatgcggccttcctaaggaa
atggctcttgaactctttaaaccctttgtgatgaaaaagctcgtaaacgaagggcacgct
cataatattaaaagcgctaaacgaatggttgagcgcgtacgccctgaagtctgggatgtt
ttagaggaagtcattaccgatcatcctgtactgttaaaccgtgctccaacccttcaccgt
ttaggaatccaggcttttgaaccaatcttggttgaaggccgtgcgttacagattcatccc
ctcgtctgcacggcgtataacgctgactttgacggggaccaaatggctgtacacgttcct
ttgtcggcagaagctcaagccgaagctcgtttgttgatgctggcctcccataatatcctg
aatcctaaggacggccgtcccgtgcaaactcctacccaagacatggtcttaggctcctac
tacttaacgatggagcgaccaggggctttcggcgaaggtaaaatattcaaagatttcaat
gaagctgttttagcttatgatacaggtgaggtccatttacaagcgaagataaaagttcgg
cgtgacgatgggcttttggagacgacagtcggtcgcttgatcttcaattctgtaatacct
aaagagatcggctatttcaatgaggttgtcggcaaaaagggtctcggtgagattgtagct
aagacttatcgtattgccggatatgaagctaccgcctcgctgcttgatggactgaaaagt
caaggatttaaattctcaacacgtgcagggatgactgttggtttgactgacatcaccgtt
cccgaagcgaagacagaaattctctccaatgctgaccaggccgttgctaaaacagaattg
cagtatcgccgaggtttaattaccgatgaagagcgttataatttagttatcgacacttgg
gctaaagccaccaagacagtcaccgatgccttgatggaaagcttaaatcagttcaatcct
gtctatatgatggcaacttcgggagcacggggtaatattcaacagctccgtcagttggcc
ggaatgcggggacttatggctgatccgtccggacgtactattgaattgccgattaaggct
aatttccgtgagggactgacggttttggaatacttcatctcctcccacggtgcccggaaa
ggtttggctgatacagctctaagaacggctgactcagggtatttgacccgacgtttagtc
gatgtttctcaagacgttattgtgcgtgaagaggactgtggaacatccgcgggtattatc
gtagaagatatcaaggatggcccggaaatcatcgagtccttggaagaacgactggtagga
cgttttgttctggaagatttatatcatcctacaacaggaaaacttcttgctactccggaa
aaggaaatgacggaagaacaagcaaaagagattgcagctgtgtttgattccgtggttatc
cgatctgttcttgcctgtacatcacgttatggagtttgcaaaaagtgttatggacgtaat
ttggctaccggccggcctgtagaaatgggtgaagctgtggggattatcgcagcacaatcc
atcggtgagccaggtacgcagctgacgatgcggacattccatactggcggtgtagccgga
gacgatataacacaaggtcttccgcgggtcgaagaattgttcgaagcccgtaaacctaaa
gggcaagcgattatatcagaagtcaaagggaaagtttccatcagtgaagttaagggacgc
cgagaggtggagatcaccactgactccgatgagcatatcacctataccataccttacggg
tctcgtctcagtgtgaaagacggtcagatggttgaggcaggggatgaacttacagaagga
agtattaatccgcatgatatgctgaaggttaaaggccagcgcggggttcaggtttatctc
gtaggcgaggttcagcgtgtgtaccgcctgcagggcgttgatattaacgataagcatatt
gaggttatggttcgccagatgctgcgcaaggttaaaattgatgatgccggtgacacaagc
ctgctgccgggcggtctcattgatatttttgattttcaggacgagaacgccaaagcaatt
gccaatggaggagaaccggctgtcgctcacgcagtattgctggggataaccaaagcctcg
ttggccacagattccttcctgtctgctgcttcgttccaagaaacaacccgagtccttacc
gaagcagcgatcaaaggaaaagtggaccccctcttaggtctcaaagagaatgttatcatc
ggtaagcttattcctgcaggaacgggcatggctcgctatcgaaatatcaaaaccttcgat
gcaaatccggtttga
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integrated database retrieval system
