Desulfosporosinus acidiphilus: Desaci_1777
Help
Entry
Desaci_1777 CDS
T02148
Name
(GenBank) formamidopyrimidine-DNA glycosylase Fpg
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dai
Desulfosporosinus acidiphilus
Pathway
dai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Desaci_1777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dai03400
]
Desaci_1777
Enzymes [BR:
dai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Desaci_1777
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Desaci_1777
DNA repair and recombination proteins [BR:
dai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Desaci_1777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Zn_ribbon_8
DUF7573
DsbC_N
Motif
Other DBs
NCBI-ProteinID:
AFM40764
UniProt:
I4D4P0
LinkDB
All DBs
Position
1837856..1838677
Genome browser
AA seq
273 aa
AA seq
DB search
MPELPEVETIRRTLAVHITDLRIKDISLKWPSAVSGWRDKDFKELVLGRQILALDRRGKY
LLIHLDEEITLIAHMRMTGRLNYYPEPKEPDKHTHVVLTLERGEVHFSDVRKFGRIQAIP
TSLCIQESSLSKLGPEPLDPQFTANMLRDRLAKKKVNIKGALLDQHVLAGLGNIYADESL
FRAGISPQRPANSLTDEEIKHLHRAIQAVLQAGIDARGTSFRDYRDANGEKGQFEQALQV
YGRGGHPCRICGETLERLRLAGRTTVYCPKCQK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagttgaaacaattcgacgaaccttagctgtacacattactgat
ttaagaataaaagatatctcccttaagtggccctctgctgtcagcggctggcgggacaag
gattttaaggaacttgtcctgggaaggcaaattctagctctcgaccggcggggaaaatat
ctcctcatccacttggatgaggagataactttaatcgcccacatgcgcatgacggggcga
ttgaattattatccggaaccgaaggaaccggataaacacacgcatgtagtcctcactttg
gaacgcggggaagtgcacttttctgacgtccgaaaatttggccgaattcaagcgattcca
acctctttgtgcatccaagagtcctcgctgagcaaacttggtccggaacccttagatcca
cagtttaccgcgaatatgctgcgagatcgtttagccaagaaaaaagttaatatcaaggga
gctttgctggatcagcatgttcttgccggattgggaaacatctatgctgatgaatcactt
tttcgagcgggaatatccccccagcgcccagctaattcgcttacggatgaggaaattaag
catctgcatcgagccattcaagctgtcttacaagccggcattgatgcccgggggacctct
tttagagactatagggatgctaatggggaaaaggggcagtttgaacaagctcttcaggtt
tatggcagaggggggcatccctgtcggatttgcggcgaaactttagagcgcttgcgtttg
gccggccgtacaacggtttactgtccaaaatgtcagaagtaa
DBGET
integrated database retrieval system
