KEGG   Desulfosporosinus acidiphilus: Desaci_3523
Entry
Desaci_3523       CDS       T02148                                 
Name
(GenBank) hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
dai  Desulfosporosinus acidiphilus
Pathway
dai03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Desaci_3523
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dai03019]
    Desaci_3523
Messenger RNA biogenesis [BR:dai03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Desaci_3523
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: AFM42404
UniProt: I4D9D0
LinkDB
Position
complement(3675355..3677019)
AA seq 554 aa
MPKEHKLQIIPLGGLGEIGKNMTVIRYDNQMVLIDAGLAFPEDEMLGIDIVIPDYSYLIE
NKDLLLGILITHGHEDHIGALPYLLRDIDVPIFGTRLTLGIIQSKMKESNLNSIKATVVQ
PRDTIKLGVFRIEFIRVNHSIPDSVGIAIHTPLGTIVHTGDFKLDHTPVSGEILDIHKFS
ELGDKGVLCLLSDSTNVERAGFTPSERNVGEMIDEAFRNAKERVILASFASNVYRLQQAI
TSAVKTNRKVAVVGRSMLNIVGISAELGYLDIPEGTLVDIDEIIGLPGNQACILTTGSQG
EPMSALTRMANHDHRHVAIQPGDTVIISASPIPGNEKSVARTVDQLFKLGANVIYESAEG
MHVSGHASQEEQKLMLNMVRPKYFMPVHGEYRMLIKHAQLAEQLGIPREDIFVSENGGIV
EFTRHGAAIGGKVTAGKILIDGLGIGDVGNIVLRDRKQLSQDGILIVVMTISRSTGAIVA
GPDVVTRGFVYVRESESMLDEAKLKVRQTMARCRENNITEWAVLKSQIRDALSKQFYEKT
RRRPMILPIIQEVE
NT seq 1665 nt   +upstreamnt  +downstreamnt
ttgcccaaagaacacaaactgcaaattatccccttgggagggcttggggaaataggaaaa
aacatgaccgtgatacgttatgataatcaaatggtgcttattgatgccggtctggcattt
cctgaggacgaaatgctcggtatcgatattgttatccctgattattcatatttaattgaa
aacaaggatttgcttctcggcatattaataacccacggacatgaagatcacataggtgct
ttgccttatcttttgagagatatcgacgtacctatttttggaacgcgtttgaccctcggg
atcattcaatccaagatgaaagaaagtaatttaaatagtattaaggctactgtggttcag
ccgcgtgatactattaagctcggagttttcagaatagaatttattcgagttaatcacagc
attcccgattctgtcggaatagcaattcatactcccttggggactattgttcacaccggt
gattttaaactggatcacacaccagtatcgggagaaattctggacatccataaattctct
gaattaggggataaaggggttttatgtctcctctctgatagcaccaatgtagaaagagcc
ggctttacaccctcagaaagaaatgtcggcgagatgattgacgaggcgttccgcaatgcc
aaagagcgggttatcctggcaagctttgcctcaaatgtctaccgtttgcagcaggctatt
acttctgcggtcaaaaccaatcggaaggttgccgttgtagggcgaagtatgcttaatatt
gtgggaatttcagccgaattaggatatttggatataccggaaggtactttggttgatatt
gatgaaatcatcggtctgccgggtaatcaggcttgtatcctgacaacaggaagtcaggga
gaacctatgtctgctcttaccagaatggctaatcacgaccatcgtcatgtggccattcag
ccaggtgacacagtcattatttcagcaagtcccattccgggcaatgaaaagtctgtcgcc
agaactgtagaccagttgtttaaactcggtgccaacgttatctatgaatcggcagaggga
atgcatgtttccggtcatgcaagtcaagaagagcaaaagttaatgttaaatatggtacgt
cctaagtatttcatgccggttcacggcgaatatcgcatgctgattaagcatgctcaatta
gcggagcagttgggaattccgcgtgaagatatttttgtctctgaaaacggcggaatcgtc
gagtttactcgccatggggcagctatcggcggcaaggtaacggcgggaaaaatattgata
gatggcttaggtattggcgatgtgggaaacattgtcctgagagaccgtaaacaactctct
caagacggcattttaatcgtcgtgatgacgattagtcgttcaacaggggcaattgtggcc
ggacccgatgtggtcactcgcggttttgtctacgttcgagagtcagagtctatgttggat
gaagcgaaattaaaggttagacagactatggcccgctgccgtgagaataatataacagaa
tgggcggtactgaagagccaaatcagagatgctttaagcaagcaattttatgagaaaacc
agacgcagacctatgattttgccgattattcaggaagttgaataa

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