Desulfosporosinus acidiphilus: Desaci_3567
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Entry
Desaci_3567 CDS
T02148
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dai
Desulfosporosinus acidiphilus
Brite
KEGG Orthology (KO) [BR:
dai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dai03032
]
Desaci_3567
03400 DNA repair and recombination proteins [BR:
dai03400
]
Desaci_3567
Enzymes [BR:
dai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Desaci_3567
DNA replication proteins [BR:
dai03032
]
Prokaryotic type
DNA Topoisomerases
Desaci_3567
DNA repair and recombination proteins [BR:
dai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Desaci_3567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Ogr_Delta
Zn_ribbon_recom
Zn_ribbon_GRF
Toprim_4
Toprim_Crpt
Motif
Other DBs
NCBI-ProteinID:
AFM42448
UniProt:
I4D9H4
LinkDB
All DBs
Position
complement(3717023..3719113)
Genome browser
AA seq
696 aa
AA seq
DB search
MSKTLVIVESPAKAKSISKFLGNRYTVKASMGHLRDLPKSQLGVDLENDFEPKYIAIRGR
GDLIKDLRSAAKGADKIFLASDPDREGEAIAWHLSYLLGLKQGDKNRIEFHEITKSAIQA
AIKQPRELDMDRVDAQQARRVLDRLVGYQLSPLLWRKIKKGLSAGRVQSVAVRLVDDREE
QIRSFVSEEYWSLTANLESKGGKFTAKLLKNDDKKISISSKSEMEVILNDLQGKEFNVTD
VRAKEKKKQPAPPFTTSSLQQEAHRKLSFSPKRTMMLAQQLYEGLDLGEEGTVGLITYMR
TDSVKVAEVAQAEAKEWIISHYGNDYYPPEPRQFANKGRSQEAHEAIRPTVPLRTPDSLK
GILTRDQLRLYRLIWERFIASQMSSAVTDTLTVDIVAGSALFRANTSTIRFAGFLAVYEE
GKDEGDVQDDEQNSLTFDLSVGEPLKLIQLSEKQHFTEPPPRYTEASLVRKLEEEGIGRP
STYAPTIETIQTRGYVVKEEKQLIPTELGDIVIALLKEHFPDIVNLEFTANLEGKLDLVE
EGRVPWKSVINEYYQPFSEALALAEERIGKVKIEDQVSEELCESCGRNMVVKMGRYGKFL
ACPGFPDCRNTKPLLEQVGANCPKCGKPLVLRRSKKGRKFYGCSAYPECDFVSWEMPAPE
PCPECQQMMVIKSSKRQKKHVCTNPECRFTKVIEEE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaacactcgtaatagtagaatctccagccaaagctaaatcaatcagcaaattt
ttaggaaatcgttataccgtaaaagcctccatggggcatttgcgggatctgcctaaaagt
cagttaggagtcgatttagagaatgactttgagccaaaatatattgcaattcgcggccgc
ggggatttgatcaaggatttgcgctcggctgctaaaggagccgataaaatcttcctggcc
tctgacccggatcgtgaaggggaagccattgcctggcatctttcctatcttttagggctt
aaacaaggggacaaaaatcgtatcgaatttcatgaaattaccaaatcggcaattcaagct
gcaattaaacagcctcgtgaacttgatatggaccgggtggatgcccaacaggctcgccgg
gttttagacagattagtcggttaccagttaagcccgctgctctggcgaaaaatcaagaag
ggtttgagtgctggccgggttcaatctgtggcagtgcgtctcgttgatgatcgtgaagaa
caaattcgctcgtttgtatctgaagaatactggagtttaaccgcaaatctcgagtctaag
ggcggtaagttcacagcaaaattattaaaaaatgatgataaaaagatatccatttcctcc
aaatcagaaatggaagtcatattaaatgatctccaaggcaaagaatttaacgtaacagac
gttcgtgccaaagaaaagaaaaagcagcctgcccctccgtttacaacgagcagcttacag
caagaagcccataggaaattgagcttttcaccgaaacgtaccatgatgttagcccagcag
ctttatgagggccttgacttaggggaagaaggtaccgtcggtcttattacttacatgcgt
actgactctgttaaagtggccgaagttgctcaagcagaagcgaaagagtggattatatct
cactacggaaatgactattatcccccggaacctcgccagtttgccaataagggccgatca
caagaggcccatgaggccattcggcccacagttccgttacggactccggactcattgaag
gggattttaacacgcgatcaattacgcttgtatcgtttaatatgggaacggtttattgcc
agtcaaatgagttcagcagttacggatactttaacggttgacatcgttgccggatctgcc
ctttttcgtgctaacacttcgacaatacgttttgctggctttttagcggtgtacgaagag
ggcaaagacgagggggacgttcaggatgatgagcaaaattccctgacctttgacctttct
gttggcgaacctcttaaacttattcaactatcggagaaacaacatttcacagaacctccg
ccgcgttataccgaggcttccttggtgcgaaaattagaagaagaaggtatcgggaggccg
agcacctacgcgccaaccattgagaccatccagacaaggggttacgtcgtcaaagaagaa
aaacaattaattccgacagagttaggagatattgttatagccctacttaaagaacatttc
cccgatatcgtcaacctggagttcacggcgaatttggagggaaaactcgatcttgtggaa
gaaggcagggttccctggaagtctgttataaacgaatattatcagccgttttccgaagct
ttggccctggctgaagaacgaatcggtaaagttaaaatagaggatcaggtctccgaagaa
ctttgtgagagctgcgggcggaatatggttgtcaaaatggggagatacggaaaatttttg
gcttgcccgggatttccggactgccgaaacacaaagccgcttttggaacaagtgggggcc
aattgccctaagtgcggcaaaccgctggtccttcgccgttcgaagaagggacgtaaattt
tatggctgcagtgcttatccggagtgtgattttgtttcttgggaaatgccggcccctgaa
ccttgccccgaatgccagcagatgatggtcataaagtcgtctaagcggcagaaaaaacat
gtttgtaccaacccagagtgtcgatttaccaaggtgattgaagaagagtaa
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