Dechloromonas aquae: VX159_00690
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Entry
VX159_00690 CDS
T10882
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
daj Dechloromonas aquae
Brite
Enzymes [BR:
daj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
VX159_00690
Transfer RNA biogenesis [BR:
daj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
VX159_00690
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GFIT
Other DBs
NCBI-ProteinID:
WVT84363
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Position
complement(132897..134903)
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AA seq
668 aa
AA seq
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MNVLFEEDGGFKAGSVMADNDASLQVEMPSGKRSKIKAATVLLRFEKPSPTQLLEQATPL
AEEIEADFLWECVSDGEFSFLDFARDYYGHEPSSVEATAVLLALHAAPVYFHRKGKGRFR
KAPADILAAALANLEKKRQQALAMEGWLAALKEFRLPPEIAAITDALLYAPDRNKPETKA
FETACAETGLTAPQLLFKCGAIKSPYYLHYKRFLREQFPKGTAFPALEAPGLPADLPRSE
VRAFSIDDANTTEIDDALSVTWLPDGGSRIGIHIAAPGLAIEHGSPLDGVARARLSTVYM
PGNKITMLPDAVVQNYTLAGGVDCPAVSLYLTVDAQKQVISHESRVEIVHIAANLRHHEV
EPWFNAETVGGPLPEQPFKDELLHLWHFANACEARRGKPSAVQGVNDYNFAIVGDLADPE
SCRVEISERKRGSPLDKLVAELMIVANSTWGGLLAEKNVACLYRAQTGGKVRMTTSPLPH
EGLGVPQYAWMTSPLRRYCDLVNQWQLIACLQGQPPAFAQRSAELFAAMRDFEITYAGYA
DFQRLMERYWCLRWLQQEGVDSIAATVRREQLVKLDRLPLLLRVPSLPSGLLPGARVQLA
VEAIDLLAPEVSCRFVELLDAGSADAAAAFADELDESEGEGDAENVDGDPAEAAGEKAAG
ASAEESAA
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtattgtttgaagaagacggcgggttcaaggccggcagtgtgatggccgacaac
gacgcctcgttgcaggtcgaaatgccctcgggcaagcgcagcaagatcaaggcagccacc
gtgctgctgcggtttgaaaaaccctcgccgacgcagttgctcgaacaggcaacgccgctg
gccgaggaaatcgaagcggacttcctctgggagtgtgtcagcgatggcgaattttctttt
cttgattttgcccgagactactacggacacgagccctcgtcggtcgaagcgacggcggtc
ctgcttgccctgcacgcagcgccggtctacttccaccgcaaaggcaaggggcgcttccgc
aaagccccggccgacatccttgccgccgctctggcaaatcttgaaaaaaagcgtcagcaa
gcgctcgcgatggaaggctggcttgctgcgctgaaggagttccgcctgccgccggaaatc
gcggcgatcaccgacgcgctgctctacgcgccggaccgcaacaagcccgaaaccaaagcc
ttcgaaaccgcctgcgcagaaaccgggctgaccgcgccacagctgctgttcaagtgcggc
gcgatcaagtcgccttattacctgcactacaagcgcttcctgcgcgagcagtttcccaag
ggcaccgccttcccggcacttgaggcgcccggcctgcctgccgacctgccgcgttcggaa
gtgcgtgccttctcgatcgacgatgccaacaccaccgagatcgacgatgcgctgtcggtg
acctggctgcccgacggcggcagccgcatcggcatccacatcgccgcacccggactggcc
atcgaacacggctcgccgctcgacggcgtcgcccgcgcccgcttgtccacggtctacatg
cccggcaacaagatcaccatgctgcccgacgcggtggtgcagaactacaccctggccggc
ggcgtcgattgcccggcggtgtcgctgtatctcacggtcgacgcgcaaaaacaggtgatt
tcgcacgaatcgcgggtcgagatcgtgcatatcgcggccaacctgcgccatcacgaggtc
gagccctggttcaatgccgaaaccgtcggcgggccgctccccgagcagccgttcaaggac
gagttgctccacctgtggcacttcgccaacgcctgcgaggcacggcgcggcaagccgtcg
gcggtgcagggggtgaacgactacaacttcgccatcgtcggtgatctggccgatccggaa
agctgccgcgtcgagatcagcgaacgcaagcgcggcagcccgctcgacaagctggtcgcc
gaactgatgattgtcgccaactcgacctggggtgggctgcttgccgaaaagaacgtcgcc
tgcctctaccgcgcccagaccggcggcaaggtgcggatgaccacctcgccgctgccgcac
gaaggcctcggtgtgccgcaatacgcgtggatgacctcgccgctgcgccgctactgcgac
ctggtcaaccaatggcaattgatcgcctgcctgcagggacagccaccggcctttgcccag
cgttcggccgagttgtttgcggcaatgcgcgactttgaaatcacctacgccggctacgcc
gacttccagcgcctgatggagcgctactggtgcctgcgctggctgcagcaggaaggcgta
gacagcattgctgcaaccgtacgccgcgaacagctggtcaagctcgaccgcctgccgctg
ctgctgcgcgtgccttcgctgccgtccggcctgctgcccggcgcgcgggtgcagctggcg
gtcgaggccatcgacctgctggcgccggaagtcagctgccgttttgtcgaactgctcgac
gccggttcggccgatgccgccgcagcctttgccgacgaactcgacgagagcgaaggggaa
ggcgatgcggagaacgtcgatggcgacccggcggaagccgctggggagaaagcagccgga
gcgtcggcggaggagtcggcagcgtga
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