KEGG   Dechloromonas aquae: VX159_06350
Entry
VX159_06350       CDS       T10882                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
daj  Dechloromonas aquae
Brite
KEGG Orthology (KO) [BR:daj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:daj03016]
    VX159_06350 (truB)
Enzymes [BR:daj01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     VX159_06350 (truB)
Transfer RNA biogenesis [BR:daj03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    VX159_06350 (truB)
 Prokaryotic type
    VX159_06350 (truB)
SSDB
Motif
Pfam: TruB_N TruB-C_2 TruB_C_2 TruB_C V_ATPase_I_N
Other DBs
NCBI-ProteinID: WVT85427
LinkDB
Position
1399565..1400470
AA seq 301 aa
MQPKVKKTWKQVDGVLLLDKPIGLSSNDALQKARRLFSAAKGGHTGTLDPLASGLLPLCF
GEATKFSADLLDADKTYEAELKLGVETDSGDAEGLVIATATVDVEKSRFLALLPQFTGAI
EQVPPMHSALKRDGRPLYELARQGIEVERQPRAVTIHALELLELAGDLARIRVSCSKGTY
IRVLAADLGRALGCGAHLTALRRTRVGDLELTGAVTLAELEAQAEEARPSRLAPVDALLS
SLPRVELDSAAAERFSHGNPVALAAGLAGKIRVYAAGRLLGVGEPGSDGRLWPKRLVQLA
V
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcagcctaaagtcaaaaagacctggaagcaggtcgacggcgtcctgttgctcgacaag
ccgattggcttgtcgtccaacgatgccttgcaaaaggctcgccggctgttttctgctgcc
aaggggggacataccgggacgctcgatccgctggcttccggcctgttgcccttgtgtttt
ggcgaggcgaccaagttttcggccgacttgctcgatgccgacaagacttacgaagccgaa
ctgaagcttggagtcgaaaccgacagcggcgatgctgaaggtctggttatcgcaacggcc
acggtcgacgtcgaaaaatcccgatttctcgcgcttttgccgcaattcaccggggcgatc
gagcaggtaccgccgatgcattcggcgctcaagcgcgatggccggccgctctacgaacta
gcccgtcagggcattgaggtcgaacgacagcctcgggcggtgaccattcatgctctggag
ttgcttgagcttgccggcgatctggcgcggattcgcgtcagctgcagcaaggggacttat
atccgggtgttggccgccgatctggggcgagcattgggttgcggcgcgcatctgaccgcg
ctgcggcggactcgggtcggtgatctggagttgaccggtgcagtgactctggccgagctt
gaggcgcaggccgaagaggcgcggccatcccgcctggcaccggtcgatgcgctgctttcc
agtttgcctcgggtcgagctcgacagtgcggccgccgaacgtttcagccacggtaatccg
gtggccttggcggctggtctggccgggaaaatccgcgtctatgccgcaggccgtttgttg
ggcgttggtgagcctgggagcgacgggcgtttatggcccaagcggctggtgcaattggct
gtctga

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