Dechloromonas aquae: VX159_07465
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Entry
VX159_07465 CDS
T10882
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
daj Dechloromonas aquae
Brite
KEGG Orthology (KO) [BR:
daj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daj03400
]
VX159_07465
DNA repair and recombination proteins [BR:
daj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VX159_07465
Archaeal homologous recombinant proteins
VX159_07465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_15
ABC_tran
AAA_21
RsgA_GTPase
ABC_ATPase
nSTAND3
MMR_HSR1
DUF4315
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WVT85641
LinkDB
All DBs
Position
complement(1641673..1645347)
Genome browser
AA seq
1224 aa
AA seq
DB search
MKILRLRLKNLNSLKGEWEIDFTRPPFADNGLFAIVGPTGAGKSTLLDAICLALYHQTPR
LKSISAGDNDLMTRHTADCLAEVEFEVKGAHYRAFWSQRRSRDKADGALQAPRVELCTGK
GEIITSQSKEKLEQIARITGLDFPRFTKSMLLAQGGFAAFLNASANERAELLEELTGSEI
YGLISQRVFEQARDARARVAQLQARADGVELLGEEARTAAEQEQVGLEQRQQQLLVQTQT
LHAQRQWRLDLARAEQAQQAASERLRLARTALAEAAPGLARLAAGEPAARLQAVHAARLA
AEQALSDNQRQSSEIAGQQARLRQRQNAAASAAASAAGTLAELAGQRVRHLEDECRTLTQ
FLSEHAGRARLGEQLEGWQRDFASRDKLRAQAAQLADESRQLAGQSLQQQQARERQQTTV
NQAEQAKTAASHHLAQCEQQQQTRLGGRLLSEWRQAAEQARQAHGIWQQLGELGQQRQEL
ATTARQLQAQRQTGEQTRQALETELAGLRQRYKLQAEAVADKKKLLAQEQRIKDLEAWRR
ELQADSPCPLCGATEHPAVAAYASLDPDATAQALQAAETALEQTREDGNRAKEKLAAQQA
SLQGWQAQQTELERHLRRWQEYWQTLAASLPPGGDSAGVPGKELWQDPAALAAASAAAEQ
ASQTSRQTLHAAEAGEQSLQQARQQQAQSNEAVLKATNALALLDQEIQNLAQRRAALDKA
AADNRRALADLDAALQADLAAAGHSLPDEAHLEATANWLSQRQAEWRDWQQRQQRRHSLS
EQLGREQVAAQTARETAARWQETLAALATQDFSDFSRSTVDNSENADASPALGLGPAEAA
EPFAEPPVEPLAESGAEAHAARLAAAESAYATASQALAASDGRRQQLAEQEAGLRTALAA
ARESWQQALAASPFADEEAYRAALLTTEERQALQQLKETREQALKQAEALHAAASEQLTR
LRAERPPEWPVAAAPADGLADASGADSDGSPSGNVNAVAPLPDLDTLEQQLTRLDQERQQ
LAERLGSLRTLLARDRELRQGQQALFAEIAAQTRDSDLWQQLDGLIGSAKGDKFRRFAQG
LTLDHLLQLANRHLLRLHARYTLRRKGSGELELEVVDNWQGDVARDTRTLSGGESFLVSL
ALALALSDLVSHKTSIDSLFLDEGFGTLDGDTLDIALTALDTLNASGKTIGVISHVEALK
ERIPAQIRVDKGGGVGHSRLSIAG
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctccgcctgcgcctgaaaaacctgaattcgctgaaaggcgaatgggagatc
gacttcacccggccgccgtttgccgacaacggcctgttcgccatcgtcggcccgaccggc
gccggcaagtcgacgctgctcgacgcgatctgcctcgcgctctaccaccagacgccgcgc
ctgaagagcatttcggccggcgacaacgacctgatgacgcggcacaccgccgactgcctg
gccgaggtcgaattcgaggtcaaaggcgcgcattaccgcgccttctggagccagcggcgc
tcccgcgacaaggccgacggtgcgctgcaggcgcccagggtcgaactgtgcaccggcaag
ggcgaaatcatcaccagccagagcaaggaaaaactggaacagatcgcccggatcaccggc
ctcgacttcccccgcttcaccaagtcgatgctgctggcgcaaggcggctttgccgccttc
ctcaacgccagcgccaacgaacgcgccgaactgctggaagaactgaccggcagcgaaatc
tacggcctgatttcgcaacgggtattcgagcaggcccgcgatgcccgcgcccgcgtcgcc
cagctgcaggcccgcgccgacggcgtcgaactgctcggcgaggaagcccgcacggcagcc
gaacaggaacaggtcggcctcgaacagcgccagcagcagttgctcgtgcagacgcaaacc
ctgcacgcccaacgccagtggcggcttgacctagcccgggccgaacaagcacagcaagcc
gccagcgaacgcctgcgcctagcccggaccgcgcttgccgaggctgccccgggcctagcc
cggctggccgccggcgagccggcggcccgactgcaagcggtgcacgccgccaggctggct
gccgaacaagccctgagcgacaaccagcggcaaagcagtgagatcgccgggcagcaagcc
cggttgaggcaaaggcaaaacgcggcggccagcgccgccgccagcgcggccggaacactg
gccgagctggccgggcagcgggtccgccacctcgaagacgaatgccggacgctgacgcaa
ttcctgagcgagcacgccggccgtgcccggctcggcgaacaactcgaaggctggcagcgc
gacttcgccagccgcgacaaactgcgggcgcaggccgcgcagctggccgacgaaagccgg
caactggccggacaaagcctgcagcaacaacaggccagagaacggcagcaaaccacggtc
aaccaggcggaacaggcaaaaaccgccgccagccaccacctggcccagtgcgaacagcag
caacaaacccgcctgggaggccgcctcctcagcgaatggcgacaagcggccgaacaagcc
cggcaagcgcacggcatctggcagcaactgggcgaactcggccagcaacgccaggaactc
gccaccaccgcccgccagttgcaagcgcagcggcaaaccggcgaacaaacccggcaggcc
ctcgaaaccgaactggccggcctgcgccagcgctacaaactgcaagccgaggcggtggcc
gacaagaaaaagctgctggcgcaggaacaacggatcaaggacctcgaagcctggcggcgc
gaactgcaagccgacagcccctgcccactgtgcggcgcaaccgagcaccccgccgtcgcc
gcctatgcctcgctcgacccggacgccaccgcacaagcgctgcaagccgccgaaaccgcg
ctcgaacaaacccgcgaggacggcaaccgggccaaggaaaaactcgccgcccagcaggcc
agcctgcaaggctggcaagcgcaacaaaccgaactcgaacgccacctgcgccgctggcag
gaatactggcagaccctagccgcctcgctaccgcccggtggggacagcgccggagtgcca
gggaaagaactctggcaggacccggccgcactggcggccgcaagcgccgcagccgaacag
gccagccagaccagccggcaaaccctgcacgccgccgaggccggcgaacaaagcttgcag
caagcccgccagcaacaggcccaaagcaacgaagccgtactcaaggccaccaatgcgctg
gccctgctcgaccaggaaatccagaacctcgcccagcgccgggcagcactggacaaggcg
gccgcagacaaccgccgggcgctggccgatctcgacgccgcattgcaggccgatctcgct
gccgccggccatagcctgccggacgaagcccacctggaagcgacggccaactggctgagt
caacgccaggccgaatggcgcgactggcaacagcgccagcaacgccgccacagtctgagc
gagcaacttggccgcgagcaagtcgctgcccaaaccgcccgggaaaccgccgcccgctgg
caggaaaccctggccgcgctggcaacccaggatttttccgatttttcacggtcgaccgta
gacaacagcgaaaacgccgatgccagcccggcgctcggcctgggacctgccgaagcggcc
gagccattcgccgaaccacctgtggagccgctggccgaatccggcgccgaagcacacgcg
gcccgactggctgccgccgaaagcgcctacgccacggccagccaggccctggccgccagc
gacggccgccgccagcaactcgccgaacaggaggccggcctgcgcaccgcgctcgccgcc
gcccgcgaatcctggcagcaggcactggccgccagcccctttgccgacgaagaggcctac
cgcgccgcgctgctgactaccgaggaacggcaagccctgcagcaactcaaggaaacgcgc
gaacaagcactcaagcaagccgaagccctgcacgccgccgccagcgaacaactcacccgg
ctgcgggccgaacggccgccggaatggcctgttgcagcggcgccagccgacggtctggcg
gatgcatccggggccgattcagacgggagtccatcgggcaatgtaaatgcggtagccccg
ctacctgatctggacaccctggagcagcaactgaccaggctcgatcaggaacgccagcag
cttgccgaacgcctgggcagtctgcgcaccctgctcgcccgcgaccgggaactccgccag
ggccagcaagcgctgtttgccgaaatcgccgcgcagacccgcgacagcgatctgtggcag
cagctcgacggcctgatcggctcggccaagggcgacaaattccgccgtttcgcccaaggc
ctgaccctcgaccacctgctgcaacttgccaaccgccatctgctccgcctgcatgcccgc
tacaccctgcggcgcaaaggcagcggcgaactggaactggaggtggtcgacaactggcaa
ggcgacgtcgcccgcgatacccgcacgctttccggcggcgaaagcttcctggtcagtctg
gcgctggcgctggcactctccgatctggtcagccacaaaacctcgatcgactcgctgttc
ctcgacgaaggctttggcacccttgacggcgacaccctcgacatcgccctgaccgcgctc
gacacgctcaacgccagcggcaagaccatcggcgtgatcagccacgtcgaggcgctcaag
gaacgcatcccggcgcaaatccgcgtcgacaagggtggcggtgtcgggcattcgcggctg
agcattgccggctga
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