Dechloromonas aquae: VX159_09560
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Entry
VX159_09560 CDS
T10882
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
daj Dechloromonas aquae
Pathway
daj03030
DNA replication
daj03430
Mismatch repair
daj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
daj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VX159_09560
03430 Mismatch repair
VX159_09560
03440 Homologous recombination
VX159_09560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
daj03032
]
VX159_09560
03400 DNA repair and recombination proteins [BR:
daj03400
]
VX159_09560
Enzymes [BR:
daj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VX159_09560
DNA replication proteins [BR:
daj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VX159_09560
DNA repair and recombination proteins [BR:
daj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VX159_09560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
PAS_10
Motif
Other DBs
NCBI-ProteinID:
WVT82933
LinkDB
All DBs
Position
complement(2096037..2098202)
Genome browser
AA seq
721 aa
AA seq
DB search
MQAKHRFILAVVVLGLLMTGPFTVTSLLVWLDMREAERQMLTELLLSRLPVGTMMTLTGF
AFGVLVLHRLFKHYVEGLLRMAESLRLMRNANRDFRVAIAPDSPPEVSQLALAANELAQQ
RDELMRDVDAQVAKAKASVEEEKNRLAALMSELALAVVVCNLDGRILLYNNRARLQFTAL
AQGPTTVAGGALIGLGRSIFSILDKSQIEHAQDVIHQRFAAGKAAIANFITTARNGQLLR
VQMVPVLTGGSEAEPAMSGYVLTVENITRSIEQEARRDQVLHTLTEGSRSSIANIRAAVA
NLLDYPDMEAELRERFLGVINDEVAKRSHTIDQIMGEFSDSMKARWPLEDVLGIDIIAAA
QKRIDDKLKLPSKTEEIDDTLWIKADSFSLVFALVSLASRLEDHYDPRELRFRLTANGKL
AYLDLIWAGPAMSSETFYTWELEPLQVAGEVSPLNLRDVIDRHGGEIWYEREKAAHRAFF
RFVLPVATPENAPEVEERSRGTGRPEYYDFDLFRFEDKSINLDRKLSELAYTVFDTETTG
LEPSKGDEIIQIGAARIINNRLLRQETFDQLVDPEMPLKPESIPIHGISEDMVRGKPNID
IVLPAFHAFCEETVLIAHNAAFDMRFLQIKEERTGIRFTQPVLDTLLLSAVVHPNQESHK
LDTILERLGISIGTRHNALEDALATGAVFLKLIPLLEEQGIVTLRQALEAAEKTYFARVK
Y
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctaaacatcgcttcattcttgcagttgtcgttctcggtctgttgatgaccggt
ccattcaccgtaacctcgctgctggtctggctcgatatgagggaagccgaacggcagatg
ctgaccgagttgttgttgtcgcgtctgccggtcggcacgatgatgaccctgaccggcttt
gccttcggtgtgctggttttgcaccggctgttcaaacactatgtcgagggactgttgcgg
atggctgaatcgctacgcctgatgcgcaatgccaaccgcgatttccgtgttgccattgca
cccgacagccccccggaggtcagccagctggcgctggctgccaacgaactggcacagcag
cgcgacgaattgatgcgcgatgtcgacgctcaggtggccaaggccaaggcttcggtcgag
gaggagaagaaccggcttgccgcgctgatgtccgaactggcgctggcagtcgtggtgtgc
aaccttgacggtcgcattctgctctacaacaaccgcgcccgcctgcagttcacggccttg
gcgcaagggccgactaccgttgctggtggtgccctgatcggcttgggccggtcgattttc
tcgattctcgacaagagccagatcgagcatgcccaggacgtgatccaccaacggtttgct
gcgggcaaggcggcgatcgccaatttcattaccactgcccgcaatggtcagttactgcgc
gtccagatggtgccggtcctgaccggcggcagcgaggctgagccggcaatgagcggctac
gtgctgacggtcgagaacatcactcgcagcatcgaacaggaagcgcggcgcgaccaggtc
ctgcacactttgaccgagggcagtcgctcgtcgattgcgaatatccgggcagcggttgcc
aatctgcttgactacccggacatggaggccgaactacgcgaacgcttcctgggcgtgatc
aacgacgaggttgccaagcgcagccacactatcgaccagatcatgggtgagttctccgat
tcgatgaaggcccgttggccgctcgaagatgtgctcgggatcgacatcattgccgccgcc
cagaagcggatcgacgataaactcaaattgccgagcaagactgaagagatcgacgatacc
ttgtggatcaaggccgatagcttctcgctggtttttgcgctggtatcgctggcttcccgg
ctggaggatcattacgacccgcgggagttgcgcttccgcctgaccgccaacggcaaactg
gcttatctggatctgatctgggccggaccggcgatgtcctcggaaactttttatacctgg
gaactggagcccttgcaggtggccggtgaggtttcgccgctcaacctgcgcgatgtgatt
gaccggcacggcggagaaatctggtacgaacgcgagaaggccgcgcatcgcgccttcttc
cgtttcgtgctgccggtggccacgccggaaaacgcacccgaggtcgaggagcgcagtcgc
gggaccggacgtcccgagtactacgatttcgatctcttccgcttcgaggacaagtcgatc
aaccttgatcgcaagctgtcggaactggcttataccgtttttgatacggaaactaccggt
cttgagccatcgaagggcgacgagatcatccagatcggcgcggcgcggattatcaataac
cgtcttttgcgtcaggaaactttcgaccagctggttgatcccgagatgccgctcaagcct
gagtcgatcccgattcacggtatttccgaggacatggtgcggggcaagccgaatatcgac
attgtgctgcccgccttccatgctttctgcgaggaaaccgtgctgattgcccataacgct
gcattcgacatgcgtttcctgcagatcaaggaggagcgtaccggcatccgttttacccag
ccggtgctcgataccctgttgctgtctgcggtggtgcacccgaaccaggagtcgcacaag
ctggacaccattcttgagcgtctgggaatttcgatcggcacccggcacaatgccctggag
gatgcgctggcgaccggagccgttttcctcaagctgattccgctgctcgaggagcagggg
atcgtgaccttgcggcaggcgctggaagcagcggagaagacctattttgcccgggtcaag
tactga
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