Dechloromonas aquae: VX159_10210
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Entry
VX159_10210 CDS
T10882
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
daj Dechloromonas aquae
Brite
KEGG Orthology (KO) [BR:
daj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
daj03032
]
VX159_10210
03036 Chromosome and associated proteins [BR:
daj03036
]
VX159_10210
03400 DNA repair and recombination proteins [BR:
daj03400
]
VX159_10210
DNA replication proteins [BR:
daj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VX159_10210
Chromosome and associated proteins [BR:
daj03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
VX159_10210
DNA repair and recombination proteins [BR:
daj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
VX159_10210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
FIMAH
HU-CCDC81_euk_2
HU-DNA_bdg
HU-CCDC81_euk_1
DUF2267
HHH_RecD2
SNARE
ALF
Motif
Other DBs
NCBI-ProteinID:
WVT83052
LinkDB
All DBs
Position
2250894..2251166
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIDQIATSAEISKAAAARALDATVEAVKTALKNGDTVNLIGFGTFYVGERAARTG
RNPRTGKTLEIKAAKSPKFRAGKGLKDAIN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagactgaactgatcgaccagatcgccacttccgccgaaatttccaaggctgcc
gctgcccgcgccctcgacgctacggtagaagccgtcaagaccgcgctgaagaacggcgac
acggtcaacctgatcggtttcggcacgttctacgttggcgagcgtgctgcccgtaccggt
cgcaatccgcgcaccggcaagaccctcgaaatcaaagcggccaagtcgcccaagttccgc
gctggcaagggcctcaaggacgccatcaactaa
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