Dechloromonas aquae: VX159_12945
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Entry
VX159_12945 CDS
T10882
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
daj Dechloromonas aquae
Pathway
daj02024
Quorum sensing
daj03060
Protein export
daj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
daj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
VX159_12945 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VX159_12945 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VX159_12945 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
daj02044
]
VX159_12945 (ffh)
Enzymes [BR:
daj01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
VX159_12945 (ffh)
Secretion system [BR:
daj02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
VX159_12945 (ffh)
Eukaryotic Sec-SRP protein
VX159_12945 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
AAA_30
cobW
Helicase_RecD
AAA_16
AAA_31
DnaB_C
ABC_tran
AAA_14
YqeC
AAA_33
AAA_19
ATP_bind_1
T2SSE
AAA_26
GTP_EFTU
KTI12
APS_kinase
TsaE
Rad17
ResIII
Motif
Other DBs
NCBI-ProteinID:
WVT83580
LinkDB
All DBs
Position
complement(2845318..2846673)
Genome browser
AA seq
451 aa
AA seq
DB search
MLDNLTQRLARVMKTLKGEARLTESNIADALREVRMALLEADVALPVVKDFIAAVKEKAV
GEEVIGSLSPGQALIGVVHSELTKVMGEAHEGLNFNTQPPAIVLMAGLQGAGKTTTVGKL
AKFVKENQKKKVLVVSCDVYRPAAIEQLKSVAAQAGVDFFPSDVGQKPEEIALAAIDWAK
RHYHDLLLVDTAGRLAIDEAMMAEIKQLHAAIKPIETLFVVDAMLGQDAVNTAKAFNEAL
PLTGVVLTKLDGDARGGAALSVRHITGKPIKFAGVGEKLTGIEAFHPERMASRILGMGDV
LSLIEEARKGIDEEKAVAFAKKLKAGKGFDLNDFKEQIAQMRNMGGLTSLMDKLPAQFSQ
MAGQLPAGAENKIVGRVEGIINSMTPAERAKPELIKASRKRRIAAGAGVQVQEVNRLLNQ
FEQTQKMMKQFSKGGIGKLMRGMKGLMPGMR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacaacctgactcaacgtcttgcccgcgtcatgaagacgctcaagggcgaggct
cgcctgaccgaatcgaatattgccgatgctttgcgcgaggtgcgcatggcactgctggaa
gccgacgtggcgttgccagtggtcaaggattttattgccgccgtcaaggaaaaagccgtt
ggcgaggaggttatcggttccctgtctcctggccaggcgctgatcggcgtagtgcattcc
gaactgaccaaggtcatgggcgaggcgcacgaggggctcaacttcaatacccagccaccg
gcgatcgtcttgatggcgggtttgcagggggcgggcaagaccaccaccgttggcaagctc
gccaagttcgtcaaggaaaaccagaaaaagaaggtgctggtggtttcctgtgacgtttat
cgaccggcggcgatcgagcagttgaaatcggtggcagcgcaagccggtgtggactttttc
ccgtctgacgtcgggcaaaagccggaagagatcgcgctggcggcaatcgactgggccaaa
cggcattaccacgacctgctgctggtcgataccgctggtcgtctggcgattgacgaagcg
atgatggccgagatcaagcagctgcacgcggcgatcaagccgattgaaaccctgttcgtg
gtcgatgcgatgctggggcaggacgcagtcaatactgccaaggccttcaacgaggcgctg
ccgctgaccggtgtggtgctgaccaagctcgacggcgatgcccgggggggcgccgcactg
tcggtgcgccatatcacgggcaagccgatcaagtttgccggggtcggtgaaaagctgacc
gggatcgaggctttccaccccgagcggatggcatcgcgcatcctcggtatgggcgacgtg
ctgtcgttgatcgaagaggcgcgcaaggggatcgacgaggaaaaggccgttgcttttgcc
aagaagctgaaggccggcaagggcttcgatctcaacgacttcaaggaacaaattgcgcag
atgcgcaacatgggcggactgacctcgctgatggacaagctgccggcccagttttcgcag
atggccggtcagttgccggccggggcggagaacaagatcgttggccgcgtcgaggggatc
atcaattcgatgaccccggccgagcgggccaagcctgaattgatcaaggccagccgcaag
cgtcggattgccgccggcgccggggtgcaggtgcaggaggttaaccgtctgcttaatcag
ttcgaacagacgcagaaaatgatgaagcagttttcaaaaggcgggattggcaagctgatg
cgcggcatgaaggggttgatgccgggaatgcgctga
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