Dechloromonas aquae: VX159_13500
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Entry
VX159_13500 CDS
T10882
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
daj Dechloromonas aquae
Pathway
daj03420
Nucleotide excision repair
daj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
daj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VX159_13500
03430 Mismatch repair
VX159_13500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daj03400
]
VX159_13500
Enzymes [BR:
daj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VX159_13500
DNA repair and recombination proteins [BR:
daj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VX159_13500
MMR (mismatch excision repair)
Other MMR factors
VX159_13500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WVT83684
LinkDB
All DBs
Position
complement(2957117..2959294)
Genome browser
AA seq
725 aa
AA seq
DB search
MSDLLAHLNPPQLQAVTLPPVHALILAGAGSGKTRVLTTRIAWLLSTNQMSPHAVLAVTF
TNKAAKEMSARLAATVPFNIRSMWIGTFHGLCNRMLRAHFREAGLPQTFQILDSGDQLAM
VKRLLKNLNVDDEKYPPRELCHFFNAHKEQGVRAAQAEAYDSYTQKRVELYAEYEAQCNR
EGVCDFAELLLRCYELLSRNEPLRQHYQARFRTILVDEFQDTNRLQYAWLQLLAGGGASI
FAVGDDDQSIYRFRGAEVGNMREFERNYAGANVIRLEQNYRSHGNILAAANALIKNNSDR
LGKNLWTDAGDGEPIRVYDGYSDLDEARFVVDEVRELIRDGVSPLQIALLYRSNAQSRVL
EHELFTRAVPYKVYGGLRFFERQEIKHALAYLRLLGNPDDDTAFLRVVNFPTRGIGARSL
ESLQGLAHQFNSSLYNAAASLSGKAGQAVGAFIRLIEGLRQECEKLPLPEIIEHVLDRSG
LKQHYQSEKDGQERLENLDELINAAATFIDDDGVVMSVEGEGGALASFLAHASLEAGEHQ
AGEGQEAVQLMTVHAAKGLEFDAVFITGLEQGLFPHENAVSEGEAGLQEERRLMYVAVTR
ARKRLYLCHAQSRMLHGQTRYCTVSSFLEEIPQELLRHLGQRPTGRAVPGGGWSAGSSAR
STAGSTENALPNGLRIGQSVEHAKFGAGVIVASEGRGADARVQVNFGGATGMKWLALEYA
KLTPI
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaccttcttgcccacttgaatccgccgcaattgcaggcggtcaccctgccgccg
gtacacgccctgattcttgccggtgccggtagcggcaaaacccgggtgctgacgacgcgg
atcgcctggcttttgtcgaccaatcagatgagtccgcatgcggtgctggcggtgaccttt
accaacaaggcggccaaggaaatgagtgcccgtctggcggcgaccgtgccgttcaacatc
cgcagcatgtggatcggcaccttccatggcctgtgcaaccggatgctgcgtgcgcatttc
cgcgaggccggcctgccgcaaaccttccagattctcgatagcggcgatcaattggccatg
gtcaagcgcttgctgaagaacctgaatgtcgacgacgaaaaatacccgccgcgcgagttg
tgtcacttcttcaatgcccacaaggagcaaggggtccgtgcagcccaggctgaggcgtac
gacagctatacgcaaaagcgcgtcgagctgtatgccgagtacgaggcccagtgcaaccgc
gaaggcgtgtgcgatttcgccgaattgctgctgcgctgttacgaactgctgtcgcgcaac
gagccgctgcgccagcactatcaggcgcgcttccgcaccattctggtcgatgagttccag
gataccaaccgcctgcaatatgcctggctgcaactgctggccggtggcggcgccagtatt
ttcgcggtcggcgacgatgatcagtcgatttaccgcttccggggtgccgaggtcggtaac
atgcgcgaatttgaacgcaactacgctggcgcgaatgtgatccgcctggaacagaattac
cgttcgcacggcaacatcctggcagcggccaatgcgctgatcaagaacaacagcgaccgc
ctgggcaagaacctgtggaccgatgccggcgacggcgagccgatccgcgtctatgacggc
tattccgatctcgatgaagcccgctttgtggtcgacgaggtgcgcgagttgatccgcgac
ggggttagcccgctgcagattgcgcttctgtatcgctcgaatgcccagtcgcgggtactc
gaacacgaattgttcacccgcgccgtgccgtacaaggtctatggcggcttgcgctttttc
gagcgtcaggaaatcaagcatgcgctggcctatttgcgcctgctcggcaaccccgatgac
gataccgccttcctgcgcgtggtcaattttccgacccgtggcatcggcgcccgttcgctg
gaaagcctgcaagggctggcccaccagttcaattccagcctctacaacgcggcggcttcg
ctctcgggcaaggccgggcaggcagtcggtgccttcatccggctgatcgaaggtctgcgc
caggagtgtgaaaaactgccgctgcccgagatcatcgagcatgtgttggaccgttccggt
ctcaagcagcattaccagagcgagaaggatggccaggagcggctggagaacctggatgaa
ctgatcaacgccgccgccacctttattgatgacgacggcgtggtgatgagcgtcgaaggc
gagggcggggctttggcctccttcctcgcccatgcctcgctcgaagccggagaacaccag
gccggcgaaggtcaggaagcggtacagttgatgaccgtgcatgcggccaaggggctggag
ttcgatgctgtcttcatcaccggtctggagcagggattgtttccgcacgaaaacgcagtc
agcgagggcgaggcagggctgcaggaagagcgacgcttgatgtacgtggcagtgacccgc
gcccgcaagcggctatacctttgtcatgcgcagagccggatgctgcacggacagacgcgc
tattgcacggtgtcgtccttccttgaggaaatcccgcaggagctgctgcgtcacctcggt
cagcgcccgactggtcgtgccgtgccggggggcggctggagcgccggaagcagtgcccgg
agcacggccggatcgaccgaaaatgccctgcccaacggcctgcgcattggccaaagcgtc
gagcacgccaagtttggcgccggggtcatcgttgccagcgaggggcgcggcgccgatgcc
cgggtgcaggtcaattttggcggtgccaccgggatgaaatggctggcactggagtacgcc
aagctgacgccgatctga
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