Dechloromonas aquae: VX159_14245
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Entry
VX159_14245 CDS
T10882
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
daj Dechloromonas aquae
Pathway
daj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
daj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VX159_14245 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
daj03021
]
VX159_14245 (rpoA)
03400 DNA repair and recombination proteins [BR:
daj03400
]
VX159_14245 (rpoA)
Enzymes [BR:
daj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VX159_14245 (rpoA)
Transcription machinery [BR:
daj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
VX159_14245 (rpoA)
DNA repair and recombination proteins [BR:
daj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
VX159_14245 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
WVT83829
LinkDB
All DBs
Position
complement(3131343..3132317)
Genome browser
AA seq
324 aa
AA seq
DB search
MQSSGLLKPRIIDVQSVSPVQAKVVMEPFERGYGHTLGNALRRILLSSMPGYAPTEVAID
GVLHEYSTIDGVQEDVVDILLNLKGVVFKLHGRDVVTLKLAREGEGIVRAADIELPHDVE
IINPEHVIAHLSAGGKLNMEIKVEKGRGYVPGNVRNLGDSKTIGKLVLDASFSPIRRVAY
SVESARVEQRTDLDKLIVDIETNGIVDPEESIRYAARVLMEQLAVFADLEGTAPVAEASR
PAQVDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEIKE
VLAARGLTLGMKLENWPPAGLEKA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcagtggtcttctcaagccccgtatcatcgatgttcaaagcgtttccccggtg
caagccaaggtggtgatggagccgttcgaacgcggctacggtcatacgctgggcaatgcg
ctgcggcgtatcctgctttcgtcgatgccgggctacgcgccgactgaagtcgcaattgac
ggcgtgctgcatgagtactccaccattgatggcgttcaggaggatgtcgttgacatcctt
ttgaacctcaagggtgttgttttcaagctgcatggccgtgacgtcgtcacgctcaagctc
gctcgtgaaggtgagggcatcgttcgcgcagccgatatcgagctgccgcacgatgtcgaa
atcatcaatccggaacatgtcatcgcccatctctccgcaggtgggaagttgaacatggaa
atcaaggtcgaaaaaggccgtggttatgttccgggcaatgtccgcaacctgggcgactcc
aagaccatcggcaagttggtcctggatgcttccttttctccgatccggcgtgttgcctac
tcggtggagagtgcccgcgttgagcagcgtaccgatctggacaagttgattgtcgacatc
gagaccaacggtatcgtcgatcccgaggaatcaatccgctacgcggcccgcgtgctgatg
gagcagctggccgtgtttgctgatctcgaaggtacggcgccggtggccgaggcttcccgc
ccggcccaggtcgacccggttctattgcggccagtggatgatctcgaattgacggttcgt
tctgcgaattgtctcaaagccgagaacatctactacatcggcgatctgattcagcggact
gaaaacgagctgttgaagacgccgaatctcggtcgcaagtcgctgaacgaaatcaaggaa
gtgcttgctgcccgtggtcttaccctgggcatgaagctggaaaattggccgcccgccggc
ctggaaaaggcctga
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