Dechloromonas aquae: VX159_15380
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Entry
VX159_15380 CDS
T10882
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
daj Dechloromonas aquae
Pathway
daj03030
DNA replication
daj03410
Base excision repair
daj03420
Nucleotide excision repair
daj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
daj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VX159_15380 (polA)
03410 Base excision repair
VX159_15380 (polA)
03420 Nucleotide excision repair
VX159_15380 (polA)
03440 Homologous recombination
VX159_15380 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
daj03032
]
VX159_15380 (polA)
03400 DNA repair and recombination proteins [BR:
daj03400
]
VX159_15380 (polA)
Enzymes [BR:
daj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VX159_15380 (polA)
DNA replication proteins [BR:
daj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
VX159_15380 (polA)
DNA repair and recombination proteins [BR:
daj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
VX159_15380 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VX159_15380 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WVT84037
LinkDB
All DBs
Position
3364273..3367038
Genome browser
AA seq
921 aa
AA seq
DB search
MPLLLLVDGSSYLYRAFHALPDLRNPAGEPTGALYGVLNMLRRLDGDYKADYKAVVFDAK
GKTFRDDWYPQYKAHRPPMPDDLRAQIEPIHAAIRACGWPVLNVDGVEADDVIGTLATQA
AAAGIDSVISTGDKDLTQLVGPHVRWVNTMTDEVLDAAGVEAKFGVPPEKIVDYLALVGD
TVDGVPGVSKCGPKTALKWLAQYGSLDGVVANAEKITGVVGQNLRDHLDFLPLGKKLVTV
VCDLPDLPAPAALTVSAPDLPTLRELYSRYNFRTWLREVTAALEGGDGQAPVASAAATSG
ELAVADGDSVPAVAAPPVNYETVLDWPSFETWLARIEAAELTALDSETDGLDPFAARIVG
LSFAVEPGHACYLPLAHTAPGTPEQLPREAVLARLKPWLEAVDRKKLLQNAKFDQHIFAN
HGIALAGIADDTLLQSYVLDSGKWAGGGHDLGQLCKRHLGLDTIAFEDLCGKGAKQISFD
QVELERAATYAAEDADMTLRIHQRLRPAIAEAEGLERIYREIELPARQVIWQMERNGVLI
DGELLARQSHEIGQKLLALETQAYELAGQPFNLASPKQLGEILFTKLGLPVKKKTASGAP
STDEEVLSELALDYPLPKLLLEQRSLAKLKGTYTDKLPKMINPQTGRVHTHYAQASVVTG
RLSSSEPNLQNIPVRTEEGRRIRTAFIAPAGSSIVSADYSQIELRIMAHLSGDPRLCEAF
AHGEDVHRATAAEIFGVTPLEVGPDQRRVAKSINFGLIYGMSAFGLARQLGLERSAAQTY
IDRYFARYPGVARYMEEARQMAREQGYVETVFGRRLHFPEIKSSQAMRRQGAERAAINAP
MQGTAADLIKLAMVAVQDWLQREQLQTRLILQVHDELVLEVPDGELQAVRHQIPQLMSRV
AALRVPLVAEIGVGPNWEAAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcttgttgttggtggacggttcgtcctatctctatcgggccttccacgccctg
cccgacctgcgcaatccggccggggagcccaccggggccctgtatggcgtgctgaacatg
ctacgccggctggatggcgactacaaggcggactacaaggcggtggttttcgacgccaag
ggcaagactttccgcgacgattggtacccgcaatacaaggcgcaccggccaccaatgccg
gatgatctgcgcgcccagatcgagccgatccacgccgccatccgcgcctgcggctggccg
gtgctcaatgtcgacggcgtcgaggccgacgacgtgatcggcacgctggcaacgcaagct
gccgccgccggcatcgacagcgtgatctcgaccggcgacaaggacctgacccagctggtc
gggccgcacgtccgctgggtcaatacgatgaccgacgaagtactcgatgccgccggcgtc
gaggccaagttcggcgtaccgccggaaaaaatcgtcgattacctggcgttagtcggcgac
accgtcgacggcgttcccggcgtcagcaagtgcggtccgaaaaccgcgctcaaatggctg
gcccaatacggctcgctcgacggcgttgtcgccaatgctgaaaaaatcaccggtgtcgtc
gggcagaacctgcgcgaccacctcgacttcctgccgcttggcaagaagctggtcaccgtc
gtctgcgatctgccggatttgccggcccctgccgcgttgaccgtgagcgcgccggacctg
ccgacgctgcgcgagctgtatagccgctacaacttccgcacctggctgcgcgaggtgacg
gcggcgctggaaggcggcgacggccaggcgccagtcgcttccgccgccgcaacgagcggc
gaactcgcagtggccgacggcgacagcgtgccagccgtcgccgcaccgccggtcaattac
gagaccgtgctcgactggccgagcttcgaaacctggctggcgcgcatcgaagccgccgag
ctgaccgcgctcgacagcgagaccgacggcctcgacccgttcgccgcccgcatcgtcggc
ctctcgttcgcggtcgagcccggccacgcctgctatctcccgctcgcccacacggcgccc
ggcacgcccgagcaattgccacgcgaggcggtgctggcccggctaaaaccgtggctggaa
gcggtcgaccgtaaaaaactgctgcagaacgccaagttcgaccagcacatcttcgccaac
cacggcatcgcgctggccggaattgccgacgacacgctgctgcaaagctacgtcctcgac
tccggcaaatgggccggcggcggccacgacctcggccagctatgcaagcgccacctcggc
ctcgataccatcgccttcgaagacctgtgcggcaagggtgccaagcagatcagtttcgac
caggtcgagctcgaacgcgccgccacctacgccgccgaagacgccgacatgaccctgcgc
atccaccagcggctgcgcccggcgattgccgaggcggaaggactggagcgcatctaccgc
gagatcgaactgccggcacggcaggtgatctggcagatggaacgcaacggcgtgctgatc
gacggcgagctgctcgcccgccagagccacgaaatcggccagaagctgctggcgctggaa
acccaggcctacgaactggccggccagccgttcaacctggcctcgcccaagcagttgggc
gaaatcctgtttaccaagctcggcctgccggtcaagaaaaagaccgcctctggcgcccca
tcgaccgacgaggaagtgctttccgaactcgcgctcgactacccgctgcccaagctgctg
ctcgaacagcgcagcctggccaagctcaagggcacctacaccgacaagctgccgaaaatg
atcaacccgcagaccgggagggtgcatacgcactacgcgcaagcctcggtggtcactggc
cggctgtcgtcgagcgaaccgaacctgcagaacatcccggtacgcaccgaggaaggccgc
cgcatccgcaccgccttcatcgccccggccggcagcagcatcgtctccgccgactattcg
cagatcgaactgcggatcatggctcacctctccggcgacccgcgcctgtgcgaggccttc
gcccacggcgaggacgtgcaccgcgccactgccgccgagattttcggcgtcaccccgctc
gaagtcgggccggaccagcgccgcgttgccaagagcatcaacttcggcctgatctacggc
atgagcgctttcggcctggctcgccagctcgggctggagcgcagcgcggcgcagacctac
atcgaccgctatttcgcccgctaccccggcgttgcccgctacatggaagaagcccggcag
atggcgcgcgagcagggctatgtcgagaccgtcttcggccgccgcctgcacttccccgag
atcaagtcgagccaggcgatgcgccgccagggcgccgagcgcgccgcgatcaacgcgccg
atgcaaggcaccgccgccgacctgatcaagctggcgatggtcgcggtccaggactggctg
cagcgcgaacagctgcagacccgattgatcctgcaggtgcacgacgaactggtgctggaa
gtgcctgacggcgaactgcaggcggtacgccaccagatcccgcagctgatgagccgggtg
gcggcgctgcgggtgccgctggtcgccgaaatcggcgtcggcccgaattgggaggcggcg
cattga
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