Desulfurivibrio alkaliphilus: DaAHT2_0263
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Entry
DaAHT2_0263 CDS
T01244
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
dak
Desulfurivibrio alkaliphilus
Brite
KEGG Orthology (KO) [BR:
dak00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dak01011
]
DaAHT2_0263
Enzymes [BR:
dak01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DaAHT2_0263
Peptidoglycan biosynthesis and degradation proteins [BR:
dak01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DaAHT2_0263
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
HTH_23
HTH_IclR
GP3_package
HTH_31
Motif
Other DBs
NCBI-ProteinID:
ADH84974
UniProt:
D6Z6L5
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Position
303618..305900
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AA seq
760 aa
AA seq
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MKFAWCTHFLRSWSGAVGVAALLGALFFFSCPTGVQAEPFPVYDEIKPKVAFWKDIYSRY
PSTQGLLHDRFDLDLVYAVLEVENTWDNAARRRNRNQINAGREEYRAILLHLAAGHAPRN
AKEERVLALFGDRASPERLRRAADNIRFQRGLKDRFREGVIRSGAYLAQIKEILRQYGLP
EDLAYLPHVESSFNYEAYSRLGAAGIWQFMRATGRQYMTIDYVLDERRDPIRATHAAAQL
LRENHQRLGNWPLAITAYNHGATGMIRARNQHGDYPSIIRHYSGNRFGFASRNFYSEFLA
AREVAKNAERYFGPLDLEPQRRSHEIVLSGYVSLAELAAHLGVDVATLHRYNQGLREPVL
QGEKYVPKGYHLRLPADQPTVRLASALPDTMLRQAQRRSAFYTVRRGDTAWEIARRHGVS
LSALMAANQLNSRATIYAGQNLRIPGVDEPAVMLAAASGAGAGKTRVAEAPPAQEPTAPA
TAAAPPVEAAPEVVAVAGEPAPGQVTEQAAAEDYQVAGALADPREVAAAGARLASARDNG
WSLAMAERVAESRPDYVGEGVAPEAAGELLSSRRALSLSGNGSRLPAMTMAVAGAGEPAT
GAVNPAVVWGNLSVEEVRDLADGRRVGYIRVEVEETLGHYADWLSIPTQELRRLNGFPFG
RPIRLEQRLMIPLDRGVEQAFFEEQRYEYHKSLEEDFYAAYRVDGVETYRVRPGDNIWQL
SHDEFELPLWLIRKYNPELVLDRLRPGDEIRVPVVLARQR
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgcatggtgtacccattttttacgttcctggtcaggtgcggtcggcgtggcg
gcgctccttggcgccttgtttttttttagttgccccaccggggttcaggccgagcctttt
ccggtttacgatgaaatcaaaccgaaagttgccttctggaaggatatttacagccgttat
ccttccacccaggggttgctccacgaccgctttgatctcgatctggtctatgcggtgctg
gaggtggaaaacacctgggataacgccgcccggcggcgcaaccgcaaccaaataaacgcc
ggccgggaagagtaccgggccattctgctgcacctggcggccggccatgccccccgtaat
gccaaagaagagcgggtgctggcactgttcggcgaccgggccagcccggagaggctgcgc
cgggcggccgacaacatccgttttcagcggggtttaaaggaccgcttccgggaaggggtg
atccgttccggcgcctatctggcacaaatcaaggagattttgcgccagtacgggctgccg
gaagatctggcctacctgccccatgtggaatcttccttcaactacgaggcctacagtcgc
ctgggggcagcggggatctggcaattcatgcgggccaccggacgccagtacatgaccatt
gattatgtgctggatgaacgccgggatcccatcagggccacccatgccgccgcccagctg
ctccgggagaaccatcagcgcctgggcaactggcctctggccatcaccgcctataaccac
ggggccaccgggatgattcgggcccgtaaccagcatggcgattatccttccattattcga
cattatagcggcaatcgtttcggttttgcctcccgtaatttctattccgagtttctggcc
gcccgggaggtggccaagaacgctgagcgctactttggccctttggacttggagccccag
cggcgcagccatgaaattgtgttaagcggttacgtctccctggccgaactggctgcccat
ctgggagtggatgtagccactctgcaccgctataaccaggggttgcgggaaccggtgctg
cagggcgagaaatatgtgcccaagggctaccacttgcggctgccggccgatcagcccacg
gtgcgcctggcttcggccctgccggatacgatgctccggcaggcgcagcggcgcagtgct
ttttacacggttcgccggggtgataccgcttgggagattgcccggcgtcacggggtcagc
ctcagcgccttgatggccgccaaccagcttaactcccgggccaccatttatgccgggcag
aacctgcgcatacccggggtggatgaaccggcggtgatgctggccgcagcttccggtgcc
ggggccggtaagacccgggtggctgaagctccgcccgcccaggagccgacggcgccggca
accgccgccgcgccacctgtcgaggcggcgccggaggttgtggcggttgccggcgagcct
gctccgggccaggtaacggagcaggccgctgctgaagattatcaagtggccggggccttg
gccgatcctagggaggtggctgcggcgggtgccaggctggcctccgcccgggacaacggc
tggagtctggccatggctgaacgggtggcagagtcgcggccggactacgtcggcgaaggg
gtggcgccggaggcggctggcgagttgttgagcagccggcgcgccctgtctctttccggc
aatggctcccgcttgccggccatgaccatggcggtggccggggccggagaaccggccact
ggggcggttaatccagccgtggtatggggcaatctgtcggtggaagaggtccgggatctg
gccgatggccgccgggtgggctacattcgggtggaagtagaggagaccctggggcattac
gccgactggctaagtattcccacccaggagttgcgccgcctcaacggctttcccttcggc
cggcccatccgtctggagcagcggttgatgatcccgctggacaggggagtcgagcaggcc
ttttttgaagaacagcgctacgagtaccacaagagcctggaagaggacttttacgccgct
taccgggtcgacggggtggagacgtaccgggtgcggcccggggacaatatctggcagttg
agccacgacgaatttgaactgcccttgtggctgatccgcaaatacaaccccgaactggtg
cttgatcgtctgcgcccgggagatgagatccgggtgccggtggtgctggcccgccagcgc
tga
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