Desulfurivibrio alkaliphilus: DaAHT2_0606
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Entry
DaAHT2_0606 CDS
T01244
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dak
Desulfurivibrio alkaliphilus
Pathway
dak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DaAHT2_0606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dak03021
]
DaAHT2_0606
03019 Messenger RNA biogenesis [BR:
dak03019
]
DaAHT2_0606
Transcription machinery [BR:
dak03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DaAHT2_0606
Messenger RNA biogenesis [BR:
dak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DaAHT2_0606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
OB_RNB
AAA_25
Spore_III_AA
S1CSD-TOTE-2
ATPase_2
AAA
M_Eco57I_C
ResIII
Fungal_virus_P2_C
NACHT
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
ADH85312
UniProt:
D6Z157
LinkDB
All DBs
Position
715602..716867
Genome browser
AA seq
421 aa
AA seq
DB search
MNIGELKRKKIAELTSIAKSMNIEGYAGMRKQELIFAILQHQSAAQGKNGDNYGGGVLEV
LPDGFGFLRAPDYNYLPGPDDIYVSPSQIRRLNLRTGDTVEGPVRFPKEGERYFALLKVD
RVNFDPPEKSRDKTLFSNLTPLHPNERLNLERDPANFSTRIMDMMAPIGKGQRGLIVAPP
RTGKTVLITDIANSITKNHPEVILIVLLIDERPEEVTDMARSVNAEVISSTFDEPPQRHI
QVAEMVLDKARRLVEHQKDVVILLDSITRLARAYNTVVPPSGKILSGGVDSNALHRPKRF
FGAARNIEEGGSLTIIASALIETGSRMDDVIFEEFKGTGNMELVLDRKLADRRIFPSIDI
TKSGTRKEDLLLSAEDMNKIWILRKLLSSMNPVDAMEFLLDKMKRTKTNEDFFASMVSSS
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgaacattggggagttgaaaagaaaaaagattgccgagcttaccagtatcgccaaatcg
atgaatatcgaaggctatgccggcatgcgcaagcaggaacttatttttgccattttgcag
caccagagcgccgctcagggcaaaaacggggataactacgggggtggggtgctggaggtg
ctgccggatggtttcggttttctgcgggcgccggactataactacctgcccggccccgac
gatatctacgtttccccctcccagatccgtcgcctgaacctgcgtaccggtgataccgtg
gaagggccggtccgcttccccaaggagggcgaacgctattttgccctgctcaaagtggac
cgggtcaacttcgacccccctgagaagtcccgcgacaaaacccttttttccaacctcacc
ccgctgcatcccaatgaacggctcaacctggagcgggatccggccaacttttccacccgc
atcatggacatgatggcccccatcggcaagggccagcgcgggctgatcgtggccccgccc
cgcaccggtaaaaccgtgctgatcaccgatatcgccaacagtatcaccaaaaaccacccg
gaggtcatcctcatcgtgctgctcatcgatgagcggcccgaggaggtcaccgacatggcc
cgcagcgtcaacgccgaggtgatcagttccaccttcgatgagccgccccagcgccatatc
caggtggcggagatggtcctggacaaagctcgccggctggtggagcaccagaaagatgtg
gttattctgctggacagcatcacccgcctggcccgggcctacaataccgtggtgccgccc
agcggtaagatcctctccggcggggtggactccaatgctttgcaccggcccaaacgtttt
ttcggggcggcccgcaacatagaggaaggcggcagcctcaccatcatcgcctcggccctg
atcgaaaccggcagccgcatggacgatgtgatctttgaagagttcaagggcaccggcaat
atggagttggtgcttgatcgcaagctggccgaccggcggatctttccctccatcgatatc
accaaatccggcacccgcaaggaagatttgctgctgagcgccgaagatatgaacaagatc
tggattctccgcaaattgctctcctccatgaaccccgttgatgccatggagtttttgctg
gacaagatgaagcggaccaagaccaatgaggatttttttgcctccatggtaagcagcagc
cagtaa
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