Desulfurivibrio alkaliphilus: DaAHT2_0709
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Entry
DaAHT2_0709 CDS
T01244
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dak
Desulfurivibrio alkaliphilus
Pathway
dak03030
DNA replication
dak03430
Mismatch repair
dak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DaAHT2_0709
03430 Mismatch repair
DaAHT2_0709
03440 Homologous recombination
DaAHT2_0709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dak03032
]
DaAHT2_0709
03400 DNA repair and recombination proteins [BR:
dak03400
]
DaAHT2_0709
Enzymes [BR:
dak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DaAHT2_0709
DNA replication proteins [BR:
dak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DaAHT2_0709
DNA repair and recombination proteins [BR:
dak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DaAHT2_0709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ADH85413
UniProt:
D6Z1F8
LinkDB
All DBs
Position
complement(846359..846862)
Genome browser
AA seq
167 aa
AA seq
DB search
MTTFAAIDFETANYRSNSACAVGVVVVSHGRVVQRFYELIRPPSNWFVFTHIHGLTWRDV
RNAPAFGDIWPQIAKEMGQVEFLAAHNASFDQGVMLACCAENALPPPAPPFICTVRLSRK
QWNIHPTKLPDVCRQLQIPLHHHHAASDAEACAQIVLTALNQGWRPG
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccttcgccgccatcgatttcgaaaccgccaactaccgcagcaacagcgcctgc
gccgtgggagtggtggtggtttcccacggccgggtcgtgcagcgtttttacgagttgatc
cggccgccatcgaactggtttgtgtttacccacatccacggcctgacctggcgcgatgta
cgcaacgcgccggctttcggcgatatttggccgcaaattgctaaagagatgggccaggtg
gaatttctggccgcccacaatgcttctttcgaccagggcgtaatgctggcctgttgcgcc
gaaaatgccctgccgccgccggccccgccctttatctgcaccgtgcgactgtctcgcaag
caatggaacattcaccccaccaagctgcccgatgtctgccgccagctgcaaatccccctg
caccaccaccatgccgcctcagatgccgaagcatgcgctcagatcgtactgaccgccctg
aaccagggctggcggccggggtga
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