Desulfurivibrio alkaliphilus: DaAHT2_0715
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Entry
DaAHT2_0715 CDS
T01244
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dak
Desulfurivibrio alkaliphilus
Pathway
dak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DaAHT2_0715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dak03400
]
DaAHT2_0715
Enzymes [BR:
dak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DaAHT2_0715
DNA repair and recombination proteins [BR:
dak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DaAHT2_0715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
RecD_N
Viral_helicase1
NAT10_TcmA_helicase
SH3_13
UvrD-helicase
DEAD
SLFN-g3_helicase
Herpes_Helicase
AAA_22
AAA_23
ResIII
Flavi_DEAD
T2SSE
nSTAND3
Mg_chelatase
PIF1
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ADH85419
UniProt:
D6Z1G4
LinkDB
All DBs
Position
851848..853755
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AA seq
635 aa
AA seq
DB search
MGPEMAQLMERLVKEEVLAEFDRHWLELLARLQPQSSPALLLTAALLRRAVDLGHVCLKL
PEVAAWWPAEAAAMGYAAPSPSTLLAELRHSALVDSLEPGACSHLQGATEHGPPQVAVAP
LVLSDNRLYLRRYWQYEMALADEIRARAVRVPAPPAPEVAAARLAELATAAGVELDQDQQ
AAVLGALNHYLTVISGGPGTGKTTIIFFILTLLTQMAREEGQGSDLRVLLLAPTGKATAR
LAETLRERAAEFSAMTIHRALGYQSCSPTIFRHNRSNPLAADLVVVDEASMVDLALMSKL
FAAVSPRARLVLLGDKDQLASVEAGSILGDICLAAPQLDSAVIELSREFRFDPRRGIGAL
VRGIKAGEPATVLAVPVRVDGAQNDDPKGPPAEVTLSDQPGAPAENPTLRELVLAGFRPC
LQASSPAEALARMNDFRLLCAHRRGPYGVEQLNSFCRQLLRAEGVLGEAAGRGAMGKEAR
GPADGLAPEGDYYRGQPVLVVANSYESRLFNGDLGIIWPSPDDAGQLMAFFPSAQGAPRM
LPPGRLPRHETAFAMTIHKSQGSEFNQVAVVLPPEDSPLLSRELLYTAVSRARSRVHLFG
PEQVLSRAVDRRVTRASGLAEILTRTENGHISAPI
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgggtccggaaatggcccaactgatggaacgcctggtcaaggaagaggtgctggccgag
tttgaccggcactggcttgaactgctggcccggctgcaacctcagagctcccccgccctg
ctgctgacggcggccttgctgcgccgggccgtggatttgggccacgtctgccttaagctg
ccggaggtggcggcctggtggccggcggaagccgcggccatgggttatgccgccccctcg
ccgtcgaccctgctggccgagttgcgccacagtgccctggtggacagcctggagcctggc
gcgtgcagccatcttcagggcgcaaccgagcacgggccaccacaggtcgcggtggcccct
ctggtattgagcgacaaccggctttatctgcggcgctactggcagtacgaaatggccctg
gccgatgagatcagggcaagggcggtaagggtacccgcgccgccggcgccggaggttgcc
gccgcccgcctggccgaactggcgacggcagcaggggtggaactggaccaggaccagcag
gcggcggtactgggggcgctcaaccattatctaaccgtgatttccgggggaccgggaacc
ggcaagaccaccattatcttttttatcctgaccctgctgacccaaatggccagagaagag
ggacaggggagcgatttgcgggtgctgctgctggcccccaccggcaaggcaacagctcgc
ctggcggagaccctgcgggaacgagcggcggagttttccgccatgaccatccaccgggcc
ttggggtatcaaagctgttcccccaccattttccgccataaccggagcaacccgctggcg
gccgacctggtggtggtggacgaggcctccatggtggacctggccctgatgagcaaactg
tttgccgccgtatctccccgggcccggttggtgctgctgggcgacaaggaccaactggcc
tcggtggaggccggctccattctgggcgatatctgtttggccgccccgcagctggactcg
gcggttattgagttgagccgggagttccgctttgatcctcggcggggtatcggcgccctg
gtgcgagggattaaggcgggagagccggccacggtactggcggtgccggtgcgggtggat
ggcgcccaaaatgatgaccccaaagggccgccagcagaggttactttaagtgaccaaccc
ggcgctccggcggaaaaccccaccttgcgcgagttggtgctggccggtttccggccttgc
ctgcaggcctcttccccggccgaagccctggccagaatgaatgacttccgcctactctgc
gcccatcgccggggaccatacggggtcgagcaactcaacagcttttgccggcaactgctg
cgggcggaaggagtgctgggagaggcggcaggccgtggggcaatgggaaaggaggccaga
gggccggcggacggactcgctccggaaggggattattatcgggggcaaccggtgctggtg
gtggccaacagctacgaaagccggctgttcaacggcgatctgggcattatctggccgtcg
ccggacgacgccggccaactgatggcctttttcccgtccgcccagggggcgccccgaatg
ctgccgccggggcggttgccccgccacgaaaccgcctttgccatgaccattcataaaagc
cagggttcggagttcaaccaggtggcggtggttctgcctccggaagactcacccctgctc
agccgggagctgttgtacacggctgtctcccgggctcgcagccgggttcatctcttcggc
cccgagcaggtgctcagccgggccgttgaccgccgggtaacccgcgcctccggcctggcc
gaaattttaaccaggaccgaaaacggccatatcagcgcaccaatataa
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