Desulfurivibrio alkaliphilus: DaAHT2_1160
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Entry
DaAHT2_1160 CDS
T01244
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
dak
Desulfurivibrio alkaliphilus
Brite
KEGG Orthology (KO) [BR:
dak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dak03019
]
DaAHT2_1160
03009 Ribosome biogenesis [BR:
dak03009
]
DaAHT2_1160
Messenger RNA biogenesis [BR:
dak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DaAHT2_1160
Ribosome biogenesis [BR:
dak03009
]
Prokaryotic type
rRNA processing factors
DaAHT2_1160
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
ADH85858
UniProt:
D6Z2T3
LinkDB
All DBs
Position
complement(1372511..1374046)
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AA seq
511 aa
AA seq
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MSTQLLINATPYEIRIALLEHGNLAEFYLEHPAEKGLVGNVYRGRVVRVLPGMQAAFVDV
GLERTGFLYVDDVLVTSNEVEKRLARCDRGDGTGHDTCCGHDTDPLCRRHPGQNIEDLLS
EGQDIMVQVCKEPLGSKGARLTCHITLPCRNLVFMPRTEHIGISRKIEDEDVRQMLRQDI
EALRPAGAGFIVRTVAETATNEDLEADMEFLLHTWEEIQARATTAPVPGLIYQDLDITLR
VVRDVFSPEVDQVVVDEPETYQRVLQFVETFVPHLKGRVELAPEDPPIFDAYGVELEVNR
ALERKIWLRCGGYIIIEPTEALTVIDVNTGRYVGKNGLEETIFKTNMEAAKEIAYQLRLR
NIGGIIIVDFIDMEDEEHREAVFNALKEAAKKDKSRLNILRVSEFGLVQMTRKRNREDLE
HLMCEPCNCCQGTGVIRSSRSLCYDVFRQIEREACRRQAETVVVRVHPRVAELLLREEAH
TVDYLEKKCGKRIQIMPIKDFHPEKYEFTWQ
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
ttgtccacgcaactgctgatcaacgccacgccttacgaaatccgtatcgccctgctggaa
cacggtaatctggctgagttttaccttgaacatccggcggaaaaggggctggtgggcaac
gtctaccggggtcgggtggtgcgggtgctgcccgggatgcaggccgcctttgtcgatgtg
ggcctggagcgcaccggttttctctatgtcgatgatgtgctggtaacctccaacgaagtc
gagaaacggctggcccgttgtgaccggggcgacggcaccggccatgacacctgctgcggc
catgacaccgaccccctctgccgccggcatccgggccagaatattgaagatttgctcagc
gaagggcaggatatcatggtgcaggtgtgcaaggagcccctgggcagcaagggggcccgc
ctgacctgccatatcaccctgccgtgccgcaacctggtctttatgccgcggaccgagcat
atcggtatttcccgcaaaatcgaagacgaggatgtccggcagatgttgcggcaggatatt
gaggcattgcgccccgccggcgccggattcattgtccgcacggtggcggaaacggccacc
aacgaggatctggaagcggacatggaatttttgctgcacacctgggaggagatccaggcc
cgggccaccaccgcgccggtgccggggctgatctaccaggatctcgatatcaccctgcgg
gtggtgcgcgacgtcttctcacccgaggtggatcaggtagtggtggatgaaccggaaacc
taccagcgggtgctgcagtttgtggaaacctttgtcccgcacctcaagggccgggtggag
ttggccccggaagatccacccattttcgatgcctacggcgtggagctggaggtaaaccgc
gccctggagcggaaaatctggctgcgctgtggcgggtacatcatcatcgagcccaccgag
gcccttaccgtgattgatgtcaataccggccgttacgtaggcaaaaacggcctggaagag
acgattttcaaaaccaacatggaggcggccaaggagatcgcctaccagttacggctgcgc
aacatcggcggcataatcatcgtcgatttcatcgacatggaggatgaagaacaccgggaa
gcggtgttcaacgccttgaaagaggcggccaagaaagacaagagccggcttaatatcctg
cgggtttccgagttcggtctggtccagatgacccgcaaacgcaaccgggaagacctggaa
cacctgatgtgcgaaccttgtaattgctgccagggcaccggggtgatccgttccagccgc
agcctgtgttacgatgtctttcgccagatcgagcgagaggcctgtcgccgccaggcggaa
acggtggtcgtgcgggtccatccgcgggtggccgaactgctgctccgggaggaggcccac
accgttgattacctggaaaaaaaatgcggtaaacggattcagatcatgcccatcaaggat
tttcatcccgagaaatatgagtttacttggcagtaa
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