Desulfurivibrio alkaliphilus: DaAHT2_1224
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Entry
DaAHT2_1224 CDS
T01244
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
dak
Desulfurivibrio alkaliphilus
Brite
KEGG Orthology (KO) [BR:
dak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dak03400
]
DaAHT2_1224
DNA repair and recombination proteins [BR:
dak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DaAHT2_1224
Archaeal homologous recombinant proteins
DaAHT2_1224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Cas_Cas5d
Motif
Other DBs
NCBI-ProteinID:
ADH85921
UniProt:
D6Z2Z6
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Position
1440718..1441947
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AA seq
409 aa
AA seq
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MKILHTSDWHLGRTLYGRRRYPEFSAMLDWLAEVIEQQGVETVLVAGDIFDTTAPGNRAQ
ELYYRFLCRVAASSCRHVVVIAGNHDSPTFLNAPRELLRALDVHVVGAATDPANEVLLLH
DRQGQPELLVAAVPYLRDRDVRLAEAGESLADKERKLLAGVRQHYAQVAAAAEQKLQELV
RPIPAVAMGHLFTAGGQTVEGDGVRELYVGSLAHLPAGDLPGNFDYLALGHLHVPQRVDG
ADNRRYSGSPLPMGFGEAGREKSVCLVELQAGQAAAVTTLPVPVFQPLERVQGNWESIAA
KLGELAAADQDCWLEIVYQGEEVIPELRKRLEEKIAGSRLEILRITNQRLSRHILEQTNP
SETLDDLDIYQVFQRCLETHKVPPEQQATLLQAYRETVTALQEEDRRAE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctgcatacctcagactggcaccttggccgcaccctgtacggtcgccggcgc
tacccggagttcagtgccatgctggactggctggcggaggtcattgaacagcaaggggtg
gagaccgtgctggtggccggcgacatcttcgacaccaccgcccccggcaaccgggcccag
gagctttattaccgctttctctgccgggtggccgcttcgtcttgccgccatgtggtggtg
atcgccggcaaccacgattcccccacctttttaaacgcccccagggagttattgcgggcc
ctggatgtccacgtggtgggcgctgccaccgatccggccaacgaggtgctgctgctgcac
gaccggcaagggcagccggaactgctggtggctgcggtgccctacctgcgggaccgcgat
gtgcgcctggccgaagccggcgaaagcctggcggataaagaacgcaaactgcttgccggt
gtccggcaacattacgcgcaagtggcggccgccgccgagcaaaagctgcaggaactggtt
cgaccgatacccgccgtggccatgggccacctcttcaccgccggtgggcaaacggtggaa
ggcgacggggtgcgggagctctatgtcggctctttggcccatctgcccgccggtgacctg
cccggcaattttgattacctggccctgggccatctccatgttccccagcgggtcgacggg
gcggacaaccgccgctacagcggctcaccgctgcccatgggatttggcgaagcaggccgg
gagaaaagtgtttgcctggtggagttgcaggccgggcaagcggcggccgtaaccaccctg
ccggtgccggtgttccaacctttagagcgagtacagggcaactgggaaagcattgctgca
aagctgggggaactggccgccgccgaccaggattgctggctggagatcgtataccagggc
gaagaggtaattcccgagttgcggaagcgcctggaagaaaaaatcgccggcagtcggctg
gagattctgcggatcaccaaccagcggctcagccgccacatcctggaacagaccaacccc
agcgaaaccctggacgacctggacatctaccaggtgttccagcgctgcctggaaacccac
aaagttcccccggagcagcaagccaccctgcttcaggcctaccgggaaacggtcaccgca
ctgcaggaagaagaccgccgggcggaatga
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