Desulfurivibrio alkaliphilus: DaAHT2_1225
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Entry
DaAHT2_1225 CDS
T01244
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dak
Desulfurivibrio alkaliphilus
Brite
KEGG Orthology (KO) [BR:
dak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dak03400
]
DaAHT2_1225
DNA repair and recombination proteins [BR:
dak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DaAHT2_1225
Archaeal homologous recombinant proteins
DaAHT2_1225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
AAA_21
nSTAND3
RsgA_GTPase
AAA_22
AAA_15
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ADH85922
UniProt:
D6Z2Z7
LinkDB
All DBs
Position
1441961..1445224
Genome browser
AA seq
1087 aa
AA seq
DB search
MQIRQLRLKNLNSLVGEWEIDLTHPDYASSGIFAITGPTGAGKSTILDALCLALYGTTPR
LGKITQADNEIMSRQTGECFAEATFVTAAGRYRCHWSQHRARRKPDGKLQAPKHELAEAD
SGRIMESKQRGVAEQIETVTGMDFDRFTRSMLLAQGGFAAFLQADPDQRAPILEQITGTG
IYSLISIKVHQRRGAEQRQLENLERQLTGIRLLPQEEEEQLQKELTAGQEREKELAEQIG
VGNRAIGWLDNLARLAQELAQNSRRQEELQQRRQAFAPQFTKLQRANQALELAGAHAALA
ALRQAQQADRDNRESCRRALPALEAGCHQAQNELEQAEQQRQERKNNLQAAQPLLRQARE
LDLQLRELAKPLKTTTEAIEELQRRLCELAEDQKSTELKQQTANTKLQEVDRELTDTAAD
QQLVEHLAAIEERFSDFAELSRRRQEHRQRLDEAQKRQQAAEQTWQRQQQQVQKNRRDLQ
QAEQELASKGEKLQQLLAGKELTAWRRELLTLKEAAVRRERFLESTHSMEQARGQLRPQE
PCPLCGSRSHPFANGEIPDPDPQATAACERVTKLVDTAEELEKALQRQREAMAGCKDALN
RRERESQSARYQLDNAQQTVTRLLEELRDLETSLQQQRDRLLARIAPYGIKELTPTTWEQ
ARRRLTERRDRWQTRQQEKNDLTQQLAGLKLRGEHLAEQHRQVLAERHKQQEHEQQLQQQ
RRQLSQKRQQLLGEQDPEREEQRLQHALEAAEKQVELARQALATARQEQEKVQTRSRELA
QAIDQRAKLLAQSEAEFKKRLAAADFADEAEYLAANLPEDQRRRLQRQAQQLADEEAALS
AGHQEKSRQLQELQAQQITTADKEELQAQLATLEEQRRTVQEQIGALKQKLEDNRQLRRQ
QEQQVQLLEAQRQECARWELLHELIGSADGKKFRNFAQGLTFEVMVGQANHQLKKMTDRY
LLLRDPARPLELNVVDNYQAGEIRPTRNLSGGESFLVSLALALGLSRMASRNVQVDSLFL
DEGFGTLDDEALDSALETLAGLQQDGKLIGIISHVPALKERIATRIRVVPQTGGRSSLSG
PGITHQP
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatccggcaactgcgcttaaaaaacctcaactccctggtgggggaatgggagatc
gacctgacccaccccgactatgccagcagtggcatcttcgccatcaccggacccaccggg
gccggcaagagcaccattttagacgccctgtgcctggcgttgtacggaaccaccccacgg
ctgggcaaaatcacccaggccgacaacgagatcatgagccggcagaccggcgagtgtttt
gccgaggcgacctttgtcaccgccgccggccgataccgttgccactggagccagcaccgg
gcccggcgcaagcccgacggcaaattgcaggcccccaaacatgaactcgccgaggccgac
agcggccggattatggaaagcaagcagcggggggtggctgaacagatcgaaaccgtcacc
ggtatggatttcgaccgcttcacccgctccatgctgctggcccagggcggttttgccgcc
tttctgcaagcggaccccgaccagcgggcgccgattttagagcagatcaccggcaccggc
atctacagcctgatctcgatcaaggtccaccagcgacggggggccgaacagcggcaactg
gaaaatctggagcgccaactgaccggcatccgactgctgccccaggaagaagaagagcag
ttgcaaaaagagttaaccgccgggcaggagcgggagaaggagctggccgaacaaatcggg
gtcggcaaccgggccatcggctggctggacaacctggcccgcctggcgcaggagctggcc
caaaactcccgccggcaggaggagctacaacagcgccggcaggcctttgccccccaattc
accaaactgcaacgtgccaaccaggccctggaactggccggcgctcatgccgcgcttgcc
gccctgcgccaggctcagcaagccgaccgggacaaccgggaaagttgccgccgggccctg
cccgccctggaagccggctgccaccaggcgcaaaatgaactggagcaggcggaacaacaa
cgacaggagcgaaaaaacaacctgcaagccgcccagcccctgctgcgccaggcgcgggaa
cttgacctgcaactgcgggagctggccaaaccgctaaaaaccaccactgaagccatcgaa
gagttgcagcgtcgactgtgcgagttggcagaggaccaaaaaagcaccgagcttaagcaa
caaacagccaataccaagctgcaagaagttgaccgggaactgacggacacggcggcggac
cagcagctggtggaacacctggccgccatcgaggaacgattcagcgattttgccgaactc
agccgccggcggcaggaacaccgacagcgactggacgaagcccaaaagcggcagcaggcg
gcggagcagacctggcagcgccagcagcagcaggtacagaaaaaccgccgggacttgcag
caagcggaacaagagctggcaagcaagggcgaaaaactgcaacaactgctggccggcaag
gagttgaccgcctggcgccgggagctgctgacccttaaagaggccgccgtgcggcgggaa
aggttcctggagtctacccattcgatggagcaggcccgagggcagttacggccccaggaa
ccctgccccctttgcggctcccgcagccatccctttgccaacggcgaaatcccggacccg
gacccgcaagccaccgccgcctgcgagcgggttaccaaactggtagacaccgccgaagaa
ctggaaaaagcgctgcaacggcagcgcgaggccatggccggctgcaaggatgcactgaac
cggcgggaacgggaaagccagagcgcccggtaccagctggataacgcccaacagacggta
acgcggctgctggaggagttgcgagacctggaaaccagtttgcagcagcaacgcgatcgg
ttgctggcccgcatcgccccgtacggaatcaaggagttgacccccaccacctgggagcag
gcccggcgacgactgaccgagcgccgcgaccgctggcagacccggcagcaggaaaaaaat
gatctcacccagcagcttgccggtctgaagctgcgcggcgaacacctggcggaacagcac
cggcaggtactggccgaacggcacaaacagcaggagcatgagcaacaactgcagcagcaa
cgtcggcagttgagccaaaagcggcagcaactgctgggggaacaggacccggagcgggaa
gaacagcgcctgcaacacgccctggaagccgccgaaaaacaggttgagctggcccgccag
gcactggcaaccgcccggcaggagcaggaaaaagtgcaaaccagaagccgggagctggca
caagccatcgaccagcgggctaaattattggcccagtcggaggcggagttcaaaaaacgc
ctggccgccgccgactttgccgatgaagccgaatatctcgccgccaacctgccggaagat
caacgccgccgattgcaacgccaggcccagcagttggccgacgaggaagccgcgctctcg
gccggccaccaggagaaaagccgccaattacaagaactgcaggcacagcaaatcaccacc
gccgacaaggaagaactgcaggcgcaactggccaccctggaagagcagcgccggacagtg
caggagcagatcggggcgcttaaacaaaagctggaggacaaccggcaactgagacggcaa
caggagcaacaggtccaattgctggaggcccagcggcaggaatgcgcccgctgggaactg
ctccatgagctgatcggctccgccgacggcaaaaaattccgcaacttcgctcaggggctg
acctttgaagtgatggttggccaggccaaccaccagctaaaaaaaatgaccgaccgctac
ctgctgctgcgcgaccccgcccgccctctggaactcaacgtggtggacaactaccaggcc
ggtgagatccgccccaccaggaatctctcgggcggcgagtccttcctggtcagcctggcc
ctggccctggggctttcccgcatggccagccgcaacgtgcaggtggactccttgttttta
gacgagggattcggtaccttggatgacgaggccctggacagtgcgctggaaactttggcc
ggcctgcagcaggacggcaagctgatcggcatcatctcgcatgtgccggccttaaaagaa
cggatcgccacccgcatccgggtagtgccgcaaaccggcggccgcagcagtttaagcggc
ccagggatcacccatcaaccttaa
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