Desulfurivibrio alkaliphilus: DaAHT2_1226
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Entry
DaAHT2_1226 CDS
T01244
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
dak
Desulfurivibrio alkaliphilus
Pathway
dak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DaAHT2_1226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dak03400
]
DaAHT2_1226
Enzymes [BR:
dak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
DaAHT2_1226
DNA repair and recombination proteins [BR:
dak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DaAHT2_1226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ADH85923
UniProt:
D6Z2Z8
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All DBs
Position
1445239..1446108
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AA seq
289 aa
AA seq
DB search
MPLLGAHMSVAGGLHHAFEHIHKVAGESLQIFTRNQRQWRAAPVGPEEAAAFREAWQAAK
TATGEKMPVAAHNSYLINLAGNKPETEQRSVQALSEELIRCQALQIPWLIMHPGSHLGQG
VEAGIKRCSRNLDTVLEQAGGDNRVMILLENTAGQGTNLGHRFEELAAIIAASKHPERFG
ICFDTCHAFAAGYDLRTAEAYEQTFTELDRLIGIKHLHFFHLNDATKPLGSRVDRHTHIG
QGEIGREGFRLLMNDPRFKNHPMVLETDKGPDLAEDIENLKVLRALIGQ
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgctgggagcgcacatgtcggtggctggcggcctgcaccacgcctttgagcat
atccacaaggttgcgggtgaatctttgcagattttcacccgcaaccagcgccagtggcgc
gctgctcccgtcggcccggaggaagcggcggccttccgggaagcctggcaggcggctaaa
accgccaccggggaaaagatgccggtggcggctcacaattcttacctcatcaacctggcg
ggcaacaaaccggagaccgaacagcgctccgttcaagccctctccgaagaactgattcgc
tgccaggccctgcaaatcccctggctgatcatgcaccccggctcccacctgggccaagga
gtcgaggcgggaataaaacgctgcagccgcaacctggacaccgttctggagcaggccggg
ggcgacaaccgggtcatgatcctgcttgaaaacaccgccggccagggtaccaacctgggc
caccgctttgaggaactggcagccatcatcgcggcctccaagcacccggaacgcttcggc
atctgcttcgacacctgccacgccttcgccgccggctacgacctgcgcaccgccgaggcc
tacgagcaaaccttcaccgagctggaccggctcatcggcataaagcacctgcattttttt
cacctcaacgacgccaccaagcctttgggcagccgggtggaccgccacacccacatcggc
cagggcgagatcggccgggaaggcttccgcctgctgatgaacgacccccggtttaaaaac
caccccatggttctggaaaccgacaaaggcccggacctggccgaggacatcgaaaacctc
aaggtactgcgagcgctgatcggccaataa
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